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Aliivibrio fischeri strain:MJ11 (ATCC BAA-1741) Genome sequencing
In the absence of a definition of life, efforts in building living cells from scratch have relied on subjective evaluations of progress. This lack of well defined benchmarks has... -
Aliivibrio fischeri strain:MJ11 Transcriptome or Gene expression
Gene expression profiling of wild-type (squid-naive), squid-adapted and mutant MJ11 isolates grown in SWTO to mid-log. -
Vibrio fischeri D-glutamate suppressor generation and characterization
This study used D-glutamate auxotrophic mutants of Vibrio fischeri to study the evolution of peptidoglycan biosynthesis and structure. Suppressor mutants were generated by... -
Vibrio fischeri D-alanine suppressor generation and characterization
This study used D-alanine auxotrophic mutants of Vibrio fischeri to study the evolution of peptidoglycan biosynthesis and structure. Suppressor mutants were generated by growing... -
Aliivibrio fischeri Genome sequencing and assembly
Sequencing of V. fischeri isolates cultured from the light organs of adult Hawaiian bobtail squid (Euprymna scolopes) to characterize the type VI secretion systems. -
Euprymna scolopes Transcriptome or Gene expression
Transcriptome experiment in gravity and modeled microgravity -
Aliivibrio fischeri MJ11 WT and Mutant Transcriptomes
Aliivibrio fischeri MJ11 wild-type and transposon mutant transcriptomes. Strains were cultured either in liquid LBS or high-viscosity LBS (+5% polyvinylpyrrolidone (PVP)) and... -
Testing the limits of 454 pyrotag sequencing: reproducibility, quantitative a...
The characterization of microbial community structure via 16S rRNA gene profiling has been greatly advanced in recent years by the application of amplicon pyrosequencing. The... -
bacterial multiDAP
Escherichia coli and Pseudomonas simiae transcription factor binding sites mapped in 48 bacterial genomes -
Biofilm transcriptional pathways in the model symbiont Vibrio fischeri
Beneficial microbial symbionts are often horizontally acquired by their animal hosts from environmental sources, requiring the symbionts to complete a lifestyle transition from... -
Aliivibrio fischeri, genomic and transcriptomic data
This project collects the genomic and transcriptomic data generated for Aliivibrio fischeri to facilitate genome assembly and annotation as part of the Aquatic Symbiosis... -
Aliivibrio fischeri Genome sequencing
Genome sequencing of Vibrio fischeri strains ES114-L and ESR1, and comparative analysis to strain ES114. -
Aliivibrio fischeri strain:FQ-A001 Genome sequencing and assembly
FQ-A001 Genome Sequencing -
Sequences of multiple isolates from a single adult squid light organ
72 isolates from a single adult squid light organ were sequenced to assessed the Vibrio fischeri strain diversity within the host. -
Vibrio fischeri H905 PacBio reads Apr24
Vibrio fischeri is a bioluminescent bacterium known for its mutualism with the Hawaiian bobtail squid, Euprymna scolopes. However, symbiotic capacity varies greatly even between... -
Identification of pathogenic Strain
Alivibiro -
Vibrio fischeri outer membrane vesicles RNA-seq
RNA-Seq of V. fischeri Outer Membrane Vesicles from wild-type strain ES114 and a mutant derivative strain SMG7 (ssrA clean deletion mutant) -
Aliivibrio fischeri Raw sequence reads
Experimental evolution of naive Vibrio fischeri strains to squid symbiosis -
Aliivibrio fischeri strain:ES401 Genome sequencing and assembly
ES401 Genome Sequencing -
Vibrio fischeri Raw sequence reads
We sequenced the whole genome of the Vibrio fischii isolated in our laboratory.