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16S rDNA sequencing
The object of this study is to explore the association between maternal gut microbiota and risk of congenital heart disease in offspring, as well as the possible mechanisms... -
2022/2023 Malawi Cholera Outbreak
Sequencing of Malawi Cholera samples from a 2022/2023 outbreak at the Public Health Institute of Malawi (PHIM) and the Center for Epidemic Response and Innovation (CERI). -
Genomic sequence of O1 El Tor Str. SC1998_242
By whole genome re-sequencing, we analyzed O1 El Tor V. cholerae isolated during the 7th cholera pandemic. -
Identification of promoter activity in gene-less cassettes from Vibrionaceae ...
Integrons are genetic platforms that acquire new genes encoded in integron cassettes (ICs), building arrays of adaptive functions for bacteria. ICs generally encode promoterless... -
Vibrio_cholerae_endemic_in_Mozambique
Although cholera is a major public health concern in Mozambique, its transmission patterns remain unknown. We surveyed the genetic relatedness of 75 Vibrio cholerae isolates... -
Genomic sequence of O1 El Tor V. cholerae Str. 2757
By whole genome re-sequencing, we analyzed O1 El Tor V. cholerae isolated during the 7th cholera pandemic. -
Genomic sequence of O1 El Tor V. cholerae Str. 143
By whole genome re-sequencing, we analyzed O1 El Tor V. cholerae isolated during the 7th cholera pandemic. -
Proxy upload by EnteroBase (from database Vibrio)
This project contains Illumina genomic sequences uploaded to EnteroBase (http://enterobase.warwick.ac.uk). These sequences have been assembled and genotyped in EnteroBase and... -
Evidence of Environmental Evolution of Toxigenic Vibrio cholerae in Aquatic R...
Persistent aquatic environmental reservoirs for Vibrio cholerae are present in Asia however, their existence in other parts of the world remains controversial. The single-source... -
ChIP-seq analysis of the Vibrio cholerae AphA protein
The experiment contains ChIP-seq data for Vibrio cholerae strain E7946. The strain was grown at 37 degrees in LB medium and crosslinked with 1 % (v/v) formaldehyde. After... -
Whole_Genome_sequencing_of_Vibro_cholerae_isolates_from_Bangladesh
Creation of a high quality reference genome for the Vibrio cholerae serogroup 0139 isolate. This data is part of a pre-publication release. For information on the proper use of... -
Vibrio cholerae biofilm and planktonic growth RNAseq analysis
To determine transcriptome differences in Vibrio cholerae when grown as planktonic and biofilm cultures, whole-genome level transcriptional profiling was performed using RNAseq... -
Marker Frequency data of genomic loci extracted from N16961 V. cholerae strai...
Study of the effect of L-Arabinose on chromosomes replication forks progression in Vibrio cholerae.</p><p>Processed wig.mat file. -
Mouse as host with microbiome community and Vibrio cholerae Raw sequence reads
Vibrio cholerae and mouse host gene expression under different microbiome -
The QstR regulon of Vibrio cholerae
In this study, we compared the QstR regulon to the TfoX regulon (and TfoY regulon) of V. cholerae in WT strain A1552 and its ?hapR?vpsA derivative using RNA-seq to better... -
ChIP-seq analysis of genome-wide DNA binding by transcription factors HapR an...
The experiment contains ChIP-seq data for Vibrio cholerae strain E7946. The strain was grown at 37 degrees in LB medium and crosslinked with 1 % (v/v) formaldehyde. After... -
Vibrio cholerae evolved a multifaceted adaptive strategy in response to preda...
Cholera remains a major global cause of morbidity and mortality. Bacteriophage predation of toxigenic Vibrio cholerae O1 (the causative agent of cholera) has been linked with... -
Defining_EPEC__evolution__global_distribution_and_effector_inventory
http://www.sanger.ac.uk/resources/downloads/bacteria/escherichia-coli.html This data is part of a pre-publication release. For information on the proper use of pre-publication... -
Genomic sequence of O1 El Tor V. cholerae Str. 2783
By whole genome re-sequencing, we analyzed O1 El Tor V. cholerae isolated during the 7th cholera pandemic. -
Differential RNA-seq analysis of Vibrio cholerae identifies the VqmR sRNA as ...
Quorum sensing (QS) is a process of cell-cell communication that enables bacteria to transition between individual and collective lifestyles. QS controls virulence in Vibrio...