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Oncorhynchus mykiss Raw sequence reads
Identifying ecologically significant phenotypic traits and the genomic mechanisms that underly them are crucial steps in understanding the traits associated with population... -
Head kidney and spleen IGH repertoire of VHSV-vaccinated rainbow trout
Deep sequencing of IgHmu repertoire expressed in the trout head kidney and spleen after vaccination against VHSV -
Rainbow trout heavy-chain VDJ utilization in hapten recognition
The purpose of this research was to determine how a simple antigen can shape the antibody repertoire in rainbow trout. Specifically, we sought to identify shared and unique... -
Dynamic regulation of mRNA associated with the developmental stages of skin p...
Yellow mutant rainbow trout (YR) is becoming more popular for aquaculture production in China in recent years owing to its excellent meat quality and gorgeous appearance.... -
Rainbow trout skeletal muscle challenging with IPNV - Raw sequence reads
Twenty-eight juvenile rainbow trout were intraperitoneally administered with vehicle or IPNV for five and ten days. RNA from the skeletal muscle of each fish were obtained and... -
Sequencing of the skeletal muscle transcriptome of Rainbow trout
Paired-ends reads from skeletal muscle of rainbow trout administered with cortisol, cortisol-BSA and BSA. -
Short term fasting changes the hepatic miRNAome in rainbow trout, Oncorhynchu...
Purpose: Next-generation sequencing (NGS) of small RNAs allows transcriptome level analysis of the miRNAome. The goals of this study are to identify differentially regulated... -
Oncorhynchus mykiss hkondo-0001 Transcriptome project
The marginal transcription of adiponectin gene in rainbow trout adipose suggests that the function of the adipose may be distinct from those of mammals. In order to characterize... -
Chinook salmon RADseq Wenatchee River Spring Run
RADseq data for spring run Chinook from the Wenatchee River. Used to investigate the genetic basis of age at maturity in hatchery and natural origin individuals -
Impact of yeast extract in diet on hepatic and intestinal transcriptome of ra...
This study highligths the benefit of dietary yeast extract supplementation in diet devoid of fish meal in rainbow trout. -
Characterization of the rainbow trout transcriptome using Sanger and 454-Pyro...
Background: Rainbow trout is important fish species for aquaculture and biomedical research but has no genomic data. Until genome sequence becomes available, transcriptome... -
Profiling the transcriptomic changes under acute thermal stress
Transcriptomic analysis under the acute thermal stress -
Oncorhynchus mykiss Raw sequence reads
Pathogenesis of Vibrio eelii infection of the liver of rainbow trout -
Rainbow trout raised in two rearing water systems
In a crossover design feeding experiment in two rearing water, trout was fed two non-aquatic alternative protein diets to understand the effect of the water systems on trout... -
Oncorhynchus mykiss Raw sequence reads
Normal 16S rRNA sequencing of Oncorhynchus mykiss -
Advancing European Aquaculture by Genome Functional Annotation
The European project AQUA-FAANG aims to improve understanding the genome function and usage of genotype-to-phenotype prediction in the six most important European farmed fish... -
mRNA seq of UEA-1+ Ass+ and UEA-1- Ass+ antigen sampling cells
We aimed to characterize antigen sampling cells which uptake Aeromonas salmonicida subsp salmonicida (Ass) bacterin in the gill epithelium of rainbow trout. There are two... -
The Effects of Dietary Insect Meal from Hermetia illucens Prepupae on Gut Mic...
This study aimed to evaluate the potential beneficial effect of substituting fishmeal with Hermetia illucens larvae meal in the diet of rainbow trout on the gut microbiota.... -
Interactions of erythromycin and an antibiotic-mixture to the gut microbiome ...
Erythromycin (ERY) is a commonly used antibiotic that can be found in wastewater effluents globally. Due to the mechanisms by which they kill and prevent bacterial growth,... -
Immune repertoire sequencing of heavy chain (IgM, IgD and IgT) from different...
IgD+IgM- B cells are prevalent in gills and gut but not spleen, raising the possibility that the IgD gene repertoire exhibits distinct molecular signatures in these...