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Foldclass databases for protein structural domains in CATH and TED
This repository contains databases of protein domains for use with Foldclass and Merizo-search. We provide databases for all 365 million domains in TED, as well as all... -
Dawnn benchmarking dataset: Heart cells processing and label simulation
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn model selection and hyperparmeter optimisation
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn training set simulation
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn training code and resulting model
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn benchmarking dataset: Simulated branching trajectories processing and l...
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn benchmarking code and results
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn benchmarking dataset: Simulated linear trajectories processing and labe...
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn benchmarking dataset: Mouse embryo cells processing and label simulation
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn benchmarking dataset: Simulated discrete clusters processing and label ...
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn benchmarking dataset: Organoid processing and label simulation
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Dawnn benchmarking dataset: Keratinocytes processing and label simulation
This project is a collection of files to allow users to reproduce the model development and benchmarking in "Dawnn: single-cell differential abundance with neural networks"... -
Data for manuscript 'GMP compliant isolation of mucosal epithelial cells and ...
Data points for figure 1, 2, 3, 4 and 6. GraphPad Prism 8 files -
TEM and ET datasets for: Validation of a stereological method for estimating ...
TEM images and ET z-stack (ET11) used for computing the size and density of cerebellar MFT vesicles and GC nuclei. ImageJ/Fiji particle outlines are included. -
PCD Detect: Enhancing ciliary features though image averaging and classification
A package of programs to analyse ciliary cross sections to help detect primary ciliary dyskinesia defects.
