35 datasets found

A database-driven web site on all living cephalopods (octopus, squid, cuttlefish and nautilus). Contact at cephbase@hotmail.com

A database-driven web site on all living cephalopods (octopus, squid, cuttlefish and nautilus). Contact at cephbase@hotmail.com

This dataset contains the macle indexes as well as the abridged gene2go tables constructed for each of the 18 analysed mammalian species.

The data management plan of the infrastructure concerns three types of data: • Data-U: user data stored on working spaces assigned to user and project accounts. •...

The Brassicaceae TE copies from Arabidopsis thaliana Col-0 ecotype, Arabidopsis lyrata, Capsella rubella, Arabis alpina, Brassica rapa and Schrenkiella parvula, used for Duster...

A database-driven web site on all living cephalopods (octopus, squid, cuttlefish and nautilus). Contact at cephbase@hotmail.com

The dataset is created for use in the teaching of the undergraduate course BINF200 - Analysis of Biological Sequences and Structures, first used in Autumn 2023. The dataset...

Data used in the manuscript "Simulation of adaptive immune receptors and repertoires with complex immune information to guide the development and benchmarking of AIRR machine...

This dataset contains molecular dynamic simulation data of Loxosceles phospholipase D enzymes, of both clades, in presence of different bilayer compositions. The enzymes...

raw experiment data, source code, figures, manuscript and other relevant documents for the publication

All the input data required for simulating the immune state-associated signal and subsequent machine learning model training used in the article "Profiling the baseline...

original experiment data, documents, manuscript for the publication

This upload contains all the code and software used in the manuscript "Profiling the baseline performance and limits of machine learning models for adaptive immune receptor...

Three simulated datasets with different scenarios and corresponding EMIRGE references.

raw experiment data, code, figures, manuscript and other documents for the publication

molecular dynamics (MD) simulation data for the publication

figures, analysis data, source code and other relevant documents from the co-author Sandya P. Tiwari

Data part of this archive was generated for the following publication: "MoDLE: High-performance stochastic modeling of DNA loop extrusion interactions". Preprint:...

figures, source data or code, manuscript for the publication

data files of the molecular dynamics (MD) simulations for the publication