41 datasets found

Tobacco target spot-disease severity

We studied the host- pathogen interactions between human epithelial cell line A451 with 4 main Candida pathogens (C. albicans, C. glabrata, C. parapsilosis and C. tropicalis)...

Fungus sequenced at Nevada State Public Health Lab that are not Candida auris

nextPARS experiment with C. albicans, C. Parapsilosis and NORAD molecules

Oral yeast Whole genome sequencing

Candida ATCC WGS

Genomes from the Y1000+ project aiming at sequencing the genomes of all the known Saccharomycotina yeasts

Candida albicans and Candida glabrata are fungal opportunistic pathogens with increasing incidence in worldwide, and higher than expected prevalence in Denmark. We whole-genome...

FASTQ files of ddRAD-Seq preparations of parents and progeny genomes for genotyping progeny populations.

The increased usage of long read sequencing has not been matched with publicly available databases suited for error-prone long reads when applied to metabarcodes. We address...

Aim of this project is to identify biomarkers associated with persistance of Candida strains in the host and with virulence/pathogenicity of the different strains

We mapped nucleosome positions genome-wide in 12 Ascomycetes Overall design: Illumina sequencing of mononucleosomal DNA isolated from mid-log cultures grown in rich medium...

RNA vesicles content of fungi.

DNA extracted from 16 cases of infectious keratitis, as well as 4 control corneas with no known infection, was sequenced to detect pathogenic and non-pathogenic organisms. All...

LoopSeq sequencing data derived from amplicons of the full-length 16S rRNA in bacteria, the 18S-ITS region in fungi, and random amplified segments of baterial genomes.

Pathogenic Candida fungi are a leading cause of opportunistic, hospital-associated bloodstream infections with high mortality rates, typically in immunocompromised patients....

RNA-seq of Candida albicans GE1 strain grown in chlamydospores-induction conditions

Dendritic cells from three healthy human donors were cultured in the presence or absence of either Aspergillus fumigatus, Saccharomyces cerevisiae, Candida albicans or Candida...

<b>FDA-ARGOS project update</b> <p>FDA-ARGOS database updates may help researchers rapidly validate diagnostic tests and use qualified genetic sequences to...

The study describes a workflow to encourage the clinical utility and potential of next generation sequencing for the simultaneous detection of bacteria, fungi and antimicrobial...