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Biochemically diverse CRISPR-Cas9 orthologs
CRISPR-Cas9 nucleases are abundant in microbes. To explore this largely uncharacterized diversity, we applied cell-free biochemical screens to rapidly assess the protospacer... -
RNA Atlas of Bacterial Human Pathogens Uncovers Stress Dynamics Linked to Bac...
Pathogenic bacteria encounter a variety of stressful host environments during infection. Their responses to meet these challenges protect them from deadly damages and aid in... -
FDA-ARGOS is a database with public quality-controlled reference genomes for ...
<b>FDA-ARGOS project update</b> <p>FDA-ARGOS database updates may help researchers rapidly validate diagnostic tests and use qualified genetic sequences to... -
ARGA: Antibiotic Resistance Gene Analysis in CHUAC
Whole genome sequencing of bacteria in clinical samples, mainly from the A Coruna University Hospital Complex (CHUAC, Galicia, Spain) and associated collections, under project... -
BactID
Bacterial identification run in house at UCLA -
Enhanced detection system for hospital associated transmission (EDS-HAT)
Whole genome sequencing of bacterial pathogens is combined with machine learning and data mining of the electronic medical record to enhance outbreak detection in hospitals and... -
small RNAs expressed by intracellular bacteria in infected mammalian cells
We analyzed the small RNA expression profile in cells infected by several distinct varieties of intracellular bacteria (Chlamydia, Legionella and Mycobacteria) and asked if... -
Endotracheal aspirate Raw sequence reads
Rapid detection of pathogens and antimicrobial resistance genes in ventilator-associated pneumonia in ICU by metagenomic nanopores sequencing
