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Rainbow trout RNA-seq from Swanson clonal line (13 tissues) and two tissues f...
In this study, non-normalized cDNA libraries were sequenced from 13 different tissues of fish from the Swanson YY male doubled haploid rainbow trout and two different tissues of... -
RNAseq for Rainbow trout head kidney tissue
The European project AQUA-FAANG aims to improve understanding the genome function and usage of genotype-to-phenotype prediction in the six most important European farmed fish... -
Temporal dynamics of DNA methylation patterns in response to rearing juvenile...
Here we used a controlled experiment to investigate whether hatchery-rearing conditions can influence patterns of DNA methylation in steelhead and directly assessed the... -
Oncorhynchus mykiss transcriptomic response to brominated flame retardants
Rainbow trouts were exposed chronically through the diet to two brominated flame retardants: 1,2-bis(2,4,6-tribromophenoxy)ethane (BTBPE, CAS 37853-59-1) and 2-ethylhexyl... -
Effect of Pulsed magnetic field on Oncorhynchus mykiss brain gene expression
In this study we hope to identify which genes and/or pathways are differentially regulated in the trout brain in response to exposure to a pulsed magnetic field -
Oncorhynchus mykiss Raw sequence reads
The genetic underpinnings associated with the earliest stages of plant and animal domestication have remained elusive. Because a genome-wide response to selection can take many... -
Neuronal transcriptomic alterations in bifenthrin-exposed juvenile rainbow trout
An increased use of pyrethroid insecticides have been applied to the environment following the phase-out of organochlorines. A frequently identified pyrethroid in surface waters... -
Next generation sequencing establishes the differentially expression profiles...
Purpose: mRNA-Seq to reveal the differentially expression pattern of genes in innate/adaptive immune relevant pathways, and combining to the previous DNA microarray analysis to... -
RAD Capture rainbow trout raw sequence reads
This is the raw sequence data from "RAD Capture (Rapture): Flexible and efficient sequence-based genotyping." -
Deciphering the role of the early antiviral response in the resistance to VHS...
The viral hemorrhagic septicemia virus (VHSV) is a major threat for salmonid farming and for wild fish populations worldwide. Previous studies have highlighted the importance of... -
Metabolic reprogramming links resident immunity and apoptosis in the liver of...
Background & Aims: Hepatitis induced by hepatitis B virus (HBV) infection significantly affected global public health, and illustrating the metabolic changes of... -
Social status-dependent regulation of the hepatic miRNAome in rainbow trout, ...
Purpose: Next-generation sequencing (NGS) of small RNAs allows transcriptome level analysis of the miRNAome. The goals of this study are to identify differentially regulated... -
Individual and group behaviour of 6 isogenic lines of rainbow trout under mod...
The datasets are 1) the behaviour of six isogenic lines of rainbow trout in an individual behaviour challenge lasting 25 minutes at an early stage (182-187 days post-hatching).... -
Acute hyperthermia and hypoxia resistances of 6 isogenic lines of rainbow tro...
The datasets are 1) the resistance phenotypes of 6 isogenic lines of rainbow trout challenged to acute hypoxia stress at an early stage (182-187 days post-hatching), 2) the...