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A comparison of the membrane IgM and IgT repertoire in rainbow trout
We sequenced the heavy chain variable regions of membrane IgM and IgT from multiple fish and predicted that given the more generalist role of the abundant IgM there would be... -
Oncorhynchus mykiss Transcriptome sequencing and assembly
To explore the effects of different dietary selenium levels on liver transcriptome of rainbow trout -
Integrated mRNA and miRNA expression profile analyses reveal the potential ro...
As an important cold-water economic fish species, rainbow trout (Oncorhynchus mykiss) exhibits several intra-specific variation in skin pigmentation that can give rise to... -
Comparative transcriptome analysis of rainbow trout gonadal cells (RTG-2) inf...
This project provided a comprehensively detail transcriptional analysis with differential virulence of U and J genogroup IHNV, and will shed a new light on pathogenic mechanism... -
ChIPseq for Rainbow Trout tissues
The European project AQUA-FAANG aims to improve understanding the genome function and usage of genotype-to-phenotype prediction in the six most important European farmed fish... -
Time series of membrane/secretory IgM repertoire of rainbow trout following v...
Few studies have explored how vaccination alters the B-cell receptor repertoire following vaccination of rainbow trout. In this study, we vaccinated twenty fish with TNP-KLH and... -
Transcriptome and biochemical parameters analysis in rainbow trout (Oncorhync...
Dissolved oxygen (DO) has an important impact on fish survival and reproduction, and is also one of the keys limiting conditions for healthy fish life. Rainbow trout... -
Oncorhynchus mykiss Raw sequence reads
Pathogenesis of Vibrio anguillarum infection of the liver, gills and intestine of rainbow trout -
Effects of the dietary inclusion of H. illucens larvae meal as fishmeal repla...
A 12-week feeding trial was conducted on rainbow trout (Onchorhynchus mykiss).Two diets were formulated to be isonitrogenous, isolipidic and isoenergetic (mancano CP, EE,GE).... -
Oncorhynchus mykiss RAD seq
Rainbow trout from differing aquatic climates were tested for genetic associations to thermal tolerance. -
Identification of differentially expressed Oncorhynchus mykiss microRNA in pl...
Circulating plasma microRNAs (miRNAs) are well established as biomarkers of several diseases in humans and have recently been used as indicators of environmental exposures in... -
Whole body transcriptome changes in selectively bred, resistant-, control-, a...
Identify genetic differences between resistant, control and susceptible lines of rainbow trout -
Integrated analysis of immune parameters, miRNA-mRNA interaction, and immune ...
Rainbow trout (Oncorhynchus mykiss) is an important economical cold-water fish worldwide. However, infection with infectious hematopoietic necrosis virus (IHNV) has severely... -
Oncorhynchus mykiss strain:Clear Springs Strain Variation
RAD sequencing of disease resistant and susceptible rainbow trout. -
Transcriptomics-based analysis of the mechanism and functional validation of ...
rainbow trout hepatocytes at the key time points will be used to identify differentially expressed RNAs between groups by transcriptome sequencing (mRNA, lncRNA and miRNA),... -
RNA-Seq data of buccal cavity of trout
Convergent evolution of mucosal immune responses at the buccal cavity of teleost fish -
Effects of salinity acclimation on expression profiles of lncRNA in regenerat...
In order to evaluate whether the regeneration of O. mykiss scales was affected by salinity changes, we used Illumina sequencing platform to detect the expression of LncRNA in O.... -
Oncorhynchus mykiss Rapture sequence reads from the Eel River, CA
Juvenile O. mykiss samples were collected from the Eel River, CA and sequenced using RAD-Capture (Rapture). The project goals included characterizing the genetic structure of... -
Transcriptomic sequence of rainbow trout (Oncorhynchus mykiss) liver
Transcriptomic was applied to study the effects of different diets on the liver of rainbow trout -
Migration-related phenotypic divergence is associated with epigenetic variati...
Migration is essential for the reproduction and survival of many animals, yet little is understood about its underlying molecular mechanisms. We used the salmonid Oncorhynchus...