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In vitro effects of chlorpyrifos-methyl and pirimiphos-methyl on Atlantic sal...
Adjuvants are included in pesticide formulations to improve the performance of the active agent and can thus contribute to alteration of the toxicity of pesticides detected in... -
Salmo salar gut transcriptome and microbiota
Aquaculture industry has taken measures to develop functional feeds aiming at modulating gut microbiota and related beneficial effects including health, growth and performance... -
16S microbiome analysis of amoebic gill disease in Atlantic salmon
16S microbiome analysis of gill tissue and mucus from amoebic gill disease affected Atlantic salmon from Australia -
RNAseq from Salmo salar challenged against ISAV
New insights into the transcriptional response of Atlantic salmon (Salmo salar) during exposure to the infectious salmon anemia virus (ISAV) revealed by RNA-Seq analysis -
De Novo Transcriptome Assembly, Annotation and Comparison of Four Ecological ...
Transcriptome assemblies and annotations of four ecologically important Salmonid fishes: Coregonus lavaretus, Salvelinus alpinus, Salmo salar, Salmo trutta -
An Illumina approach to MHC typing of Atlantic salmon
We have established a library preparation and bioinformatics analysis pipeline using Illumina MiSeq v3 paired end sequencing for MHC cDNA. -
Acute stress response on Atlantic salmon: A time -course study of the effects...
Animals that are exposed to a stressor enter in a state of emergency. The response to acute stress consists of a set of physiological and behavioural changes that aims to keep... -
Investigation of the transcriptomic response of Atlantic salmon (Salmo salar)...
Purpose: The aim of this study was to RNA-sequencing (RNA-seq) to investigate further the gill transcriptome during the early stage of infection, prior to the appearance of... -
Salmo salar Transcriptome or Gene expression
Atlantic salmon smolt transferred to the sea for aquaculture, or migrating to the open sea in the wild, are exposed to several infectious and non-infectious challenges that can... -
ChIP-seq of Atlantic salmon (Salmo salar) gill exposed to varying winter length
The experiment is designed to assess the impact of winter length on epigenetic status of key genes related to smoltification. Transferring fish from constant light (LL) to short... -
Sequence based microsatellite genotyping development for Salmo salar.
Previously developed microsatellite markers have been tested for the development of a sequence based microsatellite genotyping approach in Salmo salar. A total of 38 loci were... -
SNP identification in Atlantic salmon using RAD sequencing
Dense single nucleotide polymorphism (SNP) genotyping arrays provide extensive information on polymorphic variation across the genome of species of interest. This can be applied... -
Early developmental stress affects subsequent gene expression response to an ...
Stress during early life has potential to program and alter the response to stressful events and metabolism in later life. Short frequent exposure of Atlantic salmon to cold... -
Assembly of a male Atlantic salmon using long reads
We sequenced a male Atlantic salmon using the PromethION instrument from Oxford Nanopore Technologies, and polished the assembly using Illumina reads. -
Impact of rearing history on Atlantic salmon gill response to viral stimulati...
Aquaculture is a leading sector in providing sufficient high-quality protein for a growing world population, and the need for increased, year-round production has seen a rise in... -
Assembly of a male Atlantic salmon using long reads
We sequenced a male Atlantic salmon using the PromethION instrument from Oxford Nanopore Technologies, and polished the assembly using Illumina reads. -
RAD-seq data was used to generate SNP candidates for the development of a SNP...
Selective breeding programs in aquaculture species have provided huge gains in a variety of commercially important traits. Many breeding designs require an explicit... -
Sequencing of Salmo salar
This sequence came from an Atlantic salmon sample purchased from a local grocery store. -
NutrEpi Work Package 3
Three groups of Atlantic salmon were fed with graded levels of micronutrient package. 27 liver samples were collected at post-smolt. The samples were processed by two... -
Global changes in the pituitary transcriptome during male puberty in salmon
Using sibling salmon males with low genetic variation and heterozygous for the puberty-associated vgll3 locus, expression differences (mRNA) that characterize pituitaries of...