61 datasets found

Sequencing of several clinical isolates of different species

This dataset is being generated to investigate the genomic epidemiology and AMR in Salmonella sp in Victoria, Australia

Case series of travel-related multidrug resistant S. enterica serovar typhi

Sequencing data used in the manuscript including (1) The sequencing data of 16S, WMS and 2bRAD-M for MOCK (MOCK CAS and ATCC MOCK MSA 1002) and FFPE (only 2bRAD-M sequencing...

The project investigated the demography of Salmonella enterica, building on a large collection of diverse S.enterica from animals and the environment to provide context for...

This study aims to characterize the human skin facial microbiome at high resolution, covering the entirety of one side of the human face. High resolution spatial profiling has...

The Two Weeks in the World research project has resulted in a dataset of 3100 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units...

Sequences of Gram-negative pathogens of clinical samples in Lebanon and the MENA region

CDC Division of Healthcare Quality Promotion’s BioProject for whole genome sequence data of Gram-negative bacteria

EURL reference testing

Bacterial and Archaeal community structure in the central Arctic Ocean

This project involved sequencing some bacterial isolates from ATCC (https://www.atcc.org) to test ONT-only analysis methods.

Exemplary sequences of human outbreak strains from the Danish surveillance of foodborne bacterial pathogens e.g. Salmonella, STEC, Listeria

Pathogenic bacteria encounter a variety of stressful host environments during infection. Their responses to meet these challenges protect them from deadly damages and aid in...

Escherichia coli and Pseudomonas simiae transcription factor binding sites mapped in 48 bacterial genomes

Fastq files for HAI bacteria sequenced at the Nevada State Public Health Lab

This project is funded by the UK National Institute for Health Research to set up a full-fledged Global Health Research Unit (GHRU) through a grant awarded to the cGPS (Centre...

We analyzed the gut microbiome of WTCD (Wild type mice microbiome), KOCD (SIRT6 KO mice microbiome), WT-MT (WT mice transplanted with microbiome from WT mice), KO-MT (WT mice...

A microevolution study on the highly clonal monophasic Salmonella Typhimurium circulating massively in Europe since 2010 have been progressed on 300 genomes of Salmonella...