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A Seminavis robusta gene expression atlas
New RNA-seq data was generated to create a large-scale Seminavis robusta gene expression atlas profiling a wide-range of experimental conditions including life cycle stages and... -
Distinctive Growth and Transcriptional Changes of the Diatom Seminavis robust...
In aquatic habitats, diatoms are frequently found in association with Proteobacteria, many members of which employ cell-to-cell communication via N-acyl homoserine lactones... -
Associated bacteria affect sexual reproduction by altering gene expression an...
The goals of this study are to compare NGS-derived transcriptome profiling (RNA-seq) of Seminavis robusta in presence and absence of associated bacterial spent medium... -
A two-day 12h-day/12h-night transcriptome for the benthic diatom Seminavis ro...
Seminavis robusta strain 85A (MT+) was subjected to a 12h-day/12h-night photoperiod at daylight irradiances of 30 µmol photons m-2s-1. RNA-seq samples were harvested in twelve... -
RNA-seq on SIP+-treated mating type minus cultures of Seminavis robusta
In order to obtain a global view on the transcriptional changes induced by the sex-inducing pheromone released by Seminavis robusta mating type plus cells (SIP+), an RNA-seq... -
Deciphering interactions between the marine benthic diatom Seminavis robusta ...
Complex interactions between microalgae and bacteria, such as mutualism, parasitism and competition, shape the structure and functioning of photosynthetic microbial mats. Using... -
genomics data produced to generate a first reference draft of the Seminavis r...
A reference genome for the marine biofilm-forming diatom Seminavis robusta. Data was generated using both Illumina short reads (MiSeq, 300bp PE) as pacBio long read (RSII)... -
Transcripional study of phosphate and nitrogen limitation responses in the be...
Transcriptional responses of Seminavis robusta to phosphate (P) and nitrogen (N) limitation was studied in a time series experiment. The algae were grown under nutrient... -
RNA-seq data representing the response of Seminavis robusta MT+ cells to a fi...
RNA-seq dataset from Seminavis robusta MT+ cells treated with filtered medium containing the sex pheromone SIP-. Part of the dark-synchronized cultures were treated with SIP-... -
Transcriptome profiling of Cylindrotheca closterium and Seminavis robusta
We harvested samples from six genotypes of the heterothallic pennate diatoms C. closterium (? sexual size threshold) and S. robusta (< sexual size threshold), three for each... -
Seminavis robusta Transcriptome or Gene expression
Gene expression profiling of Seminavis robusta phase II. -
Fossil diatom counts (relative abundances) from the sediment core RK12, Lake ...
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