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FishPIE: a universal phylogenetically informative exon markers set for ray-fi...
Here, we present FishPIE, a nested PCR primer set of 82 phylogenetic informative exon markers for ray-finned fish phylogenetic analysis. By testing 203 species from 31 orders of... -
Genome-wide evolutionary analysis of eukaryotic DNA methylation
Eukaryotic cytosine methylation represses transposable elements, but also occurs in bodies of active genes. The extent to which these processes are conserved is unclear, and... -
Tetraodon nigroviridis miRNA profiling upon stimulation of IFN-gamma
In this study, primary cells from the T. nigroviridis spleen were treated with rIFN-gamma1 and rIFN-gamma2. An Illumina deep-sequencing method was performed, and the... -
The Tetraodon Nigroviridis Transcriptome During Early Development.
Tetraodon embryos were obtained by in vitro fertilization of eggs and their development was observed through brightfield microscopy. The embryo development was divided into... -
Modified sequencing library prep with less clean-up steps
These subdata are retrieved in same amount of reads from sequencing clean data by random. The clean data were produced from this modified sequencing library preparation using... -
The evolutionary landscape of alternative splicing in vertebrate species
How species with similar repertoires of protein coding genes differ so dramatically at the phenotypic level is poorly understood. From comparing the transcriptomes of multiple... -
Danio rerio embryonic promoterome
Goal of this study is to generate genome-wide maps of transcription initiation throughout early embryonic development of zebrafish (Danio rerio). Cap analysis of gene expression...
