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Transcript level coordination of carbon pathways during silicon-starvation in...
To characterize the transcript level component of metabolic regulation, genome-wide transcript level changes were documented in the model diatom Thalassiosira pseudonana over a... -
Diatom transcriptomics under nitrate limitation
Here, we examined the ramifications of between-species diversity by documenting the transcriptional response of three marine diatoms - Thalassiosira pseudonana, Fragilariopsis... -
Transcriptomes of marine phytoplankton and heterotrophic bacteria
In this project, transcriptomic data were produced for model microbial systems between eukaryotic phytoplankton and Roseobacter clade members. In these systems, the... -
100 Algal genome project (ALG-ALL-CODE Project) Part-1 (PRJNA517804) and Part...
100 Algal genome project (ALG-ALL-CODE Project)-part-1-and part-2. Microalgae are integral primary producers for the global ecosystem and can produce diverse, commercially... -
Thalassiosira pseudonana induction of sexual reproduction
RNA-seq dataset of the induction of sexual reproduction in Thalassiosira pseudonana and non-inducing control. -
Stress responses of the marine diatom Thalassiosira pseudonana CCMP1335
Diatoms were grown under 12 experimental conditions (include the control, filtration & centrifugation treatment, starvations of N, P, Si, and Fe, change of light and... -
Diatoms exposed to inhibitory conditions
Diatoms exposed to inhibitory conditions -
Multiple omics reveals coral reefs are living stones
Coral reefs are the cornerstone of global marine ecosystems, providing a shelter for over one third of marine organisms. In this bioproject, we have sequenced the genomes,... -
The role of phloroglucinol on promoting the growth of Thalassiosira pseudonana
To further clarify the mechanism by which phloroglucinol promoting the growth of T. pseudonana -
Transcriptomic profiling of co-cultured marine phytoplankton and heterotrophi...
In this project, transcriptomic data were produced for model microbial systems between marine bacteria and eukaryotic phytoplankton. These co-culture systems consisted of the... -
Thalassiosira weissflogii, Thalassiosira pseudonana, and Cyclotella striata s...
Environmental sampling and culturing of 3 diatom species for evolutionary experiments.</p><p>To explore the transcriptional networks underlying phenotypic changes in... -
Dnmt1-Independent CG Methylation Contributes to Nucleosome Positioning in Div...
Dnmt1 epigenetically propagates symmetrical CG methylation in many eukaryotes. Their genomes are typically depleted of CG dinucleotides because of imperfect repair of deaminated... -
The diatom Thalassiosira pseudonana grown in mesocosms at contemporary and el...
To test whether elevated CO2 , which drives seawater below pH 7.9, would shift the dynamical expression patterns diatoms in a more natural environment, we designed a controlled... -
Five diatoms transcriptomes under iron limitation and oxidative stress
Divergent functions of two clades of flavodoxin in diatoms mitigate oxidative stress and iron limitation Thalassiosira pseudonana and 4 open-ocean diatoms were subjected to iron... -
Light-dependent metabolic shifts in the model diatom Thalassiosira pseudonana
Diatoms are major producers of carbon and energy in aquatic ecosystems, however their ability to rapidly and successfully acclimate to wide ranging irradiances is poorly... -
RNA-seq of Thalassiosira pseudonana during resting cell formation
To induce resting cells, vegetative cells of T. pseudonana from the early stationary growth phase were harvested and concentrated in fresh f/2 medium to achieve a concentration... -
Distinct genome-wide alternative polyadenylation during silicon starvation re...
This study is to reveal the dynamic change of alternative polyadenylation in the silicon response of diatoms (Thalassiosira pseudonana),the results can also be used to improve... -
Environmental fluctuations accelerate molecular evolution of thermal toleranc...
Diatoms contribute roughly 20% of global primary production, but the factors determining their ability to adapt to global warming are unknown. Here we quantify the capacity for... -
Transcriptomic profile reveals different strategies in response to light and ...
Transcriptomic profile reveals different strategies in response to light and nitrogen stress of two Thalassiosira species, Nov 21 '23 -
Diatom acclimation to elevated CO2 via novel gene clusters and cAMP-signaling
Diatoms are responsible for ~40% of marine primary productivity1, fueling the oceanic carbon cycle and contributing to natural carbon sequestration in the deep ocean2. Diatoms...