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Reads and pairwise distances from 10 samples of diatoms in Geneva lake
This dataset contains 55 hdf5 files related to 10 samples (one per month) of benthic diatoms collected in Geneva lake at monthly interval in the same location (close to UMR... -
METABARFOOD - Description of the sequences used in mock communities
This report gives informations about reference sequences used for the analysis of mock communities. -
Diatom endemism: an assessment in high-altitude alpine lakes covering a large...
Fasq files, metadata, and communities datatables. -
METABARFOOD - Results on mock communities, choice of the bioinformatics solution
Results obtained from mock communities -
Test dataset for assessment FROGS 16S amplicon methodology
Grinder (v.0.5.3) (Angly, et al., 2012) was used to simulate the PCR amplification of fulllength (V3V4 and V4) sequences from reference databases. We generated 25 sets of... -
Hatching-data_Gautier-et-al_FIM
Hatching rates of Globodera pallida in native and recolonized soils (A, D, F and J) for each replicate in each modality (dose 1, dose 2 and control). -
Metabarcoding datasets and bioinformatic scripts for the LEARN_BIOCONTROL pro...
Metabarcoding datasets describing the foliar mycobiome of grapevine (Vitis vinifera L.) leaves collected in the LEARN-BIOCONTROL project. Bioinformatic scripts used to analyze... -
Test dataset for assessment FROGS ITS methodology
Our objective was to create datasets allowing, among other things, to test methods and tools to process data from Fungi metabarcoding sequencing. Consequently, we have... -
Metabarcoding Invertebrate communities in a natural park
Library Preparation strategy and detailed information of laboratory workflow used for the analysis of soil and insect bulk samples via metabarcoding -
Replication Data for: Novel frontier in wildlife monitoring: identification o...
Small rodents are prevalent and functionally important across the world’s biomes, making their monitoring salient for ecosystem management, conservation, forestry and... -
An 18S V4 rDNA metabarcoding dataset of protist diversity in the Atlantic inf...
Arctic marine protist communities have been understudied due to challenging sampling conditions, in particular during winter and in deep waters. The aim of this study was to...