18 datasets found

Canopy-forming kelps create underwater forests that are among the most productive marine ecosystems. On the Pacific coast of North America, two canopy-forming kelps with...

Atl salmon study ABSTRACT Successful rearing of fish in hatcheries is critical for conservation, recreational fishing, and commercial fishing through wild stock enhancements,...

The European common cuttlefish, Sepia officinalis, is used extensively in biological and biomedical research yet its microbiome remains poorly characterized. We analyzed the...

The Earth Microbiome Project Multi-omics component (EMP500) involves amplicon and shotgun metagenomic sequencing and metabolomic profiling of over five hundred microbial...

Fish are the most diverse and widely distributed vertebrates, yet little is known about the microbial ecology of fishes nor the biological and environmental factors that...

We are interested in whether the host fish microbiome is important for host adaptation to alternate osmotic niches. Toward this goal, we seek to describe the patterns of...

Investigation of the microbiome in the gastrointestinal tract of the rabbitfish Siganus fuscescens including samples from the gut content and gut wall of the mid and hind gut...

combined samples sequenced with primers modified for forward barcoding on the 515f site, extended to include V5 and improved ITS

Samples were taken from species Porities lobata, Montipora capitata, Montipora flabellata and subjected to 16S sequencing for bacterial profiling and LC-MS/MS for metabolomic...

The goal of this study was to catalogue the microbial constituents and diversity of the zebrafish intestinal microbiota throughout the development of the host. A sibship of...

Catfish gut metagenome

We performed metagenomic analyses for RNA viral community by targeting long dsRNA in cellular organisms, a hallmark of infection or replication of both dsRNA and ssRNA viruses...

The majority of seafood is produced from farming, with most finfish coming from freshwater ponds. Across continents, aquaculture is growing fastest in Africa at 11.7 % annual...

One plate of samples was extracted using several different extraction tools (new, faster) for comparison with the existing pipeline

The goal of this study was to test the role of adaptive immunity as an ecological filter on the zebrafish intestinal microbiota. We surveyed the intestinal microbiota of both...

The goal of this study was to characterize how life-long diets different in dietary fat levels impact zebrafish gut microbioa assembly. A cohort of embryos born from one sibship...

Introduction: In short bowel syndrome (SBS), luminal factors influence adaptation in which truncated intestine increases villus lengths and crypt depths to increase nutrient...

The goals of this study were to obtain a genome sequence on Ichthyophonus hoferi, a parasite found in marine and freshwater fishes.