126 datasets found

16S rRNA amplicon sequences derived from autonomous sampling in the East Greenland Current (mooring EGC-5).

Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial...

Analysis of nifH gene diversity from four Arctic regions (rivers, seawater and sediment traps) during 2014 and 2019

To investigate the effects of concurrent environmental change and heatwaves, we performed an incubation experiment in the mesocosm facility of the Alfred Wegener Institute on...

We compared different fixatives for long-term preservatuon of marine microbial communities in seawater, and how these impact subsequent amplicon sequencing.

The uploaded strain is an aerobic denitrifying bacterium capable of rapid growth and reproduction at a salinity of 3%. It utilizes various inorganic nitrogen sources,...

Water samples were collected with free-flow niskin bottles connected to a CTD rosette. Metagenome reads were generated with Illumina HiSeq 2500. DNA and RNA were extracted using...

On-board sequencing of the microbial community along the SO245 "Ultrapac" cruise which traversed the South Pacific Gyre. A total of 11 stations were sampled at multiple depths...

In oligotrophic oceans, microbial communities sustain productivity in coral reef ecosystems. As the health and distribution of coral reefs decline worldwide, characterizations...

A large fraction of the organic matter fixed in the oceans is transformed and remineralised by marine heterotrophic microorganisms. They, therefore, play a critical role in the...

16S rRNA gene sequences from the soft tissues and shell-surface swabs of 7 species of marine gastropods in the genera Cerithium and Cerithideopsis. Samples were collected in...

This study provides the first molecular characterisation of the bacterial community composition off the coast of Mauritania and Senegal. During the Meteor M129 cruise coastal,...

The bacterial community at 2,000-m depth was studied over one-year survey in 2011 at the ANTARES site (Northwestern Mediterranean Sea). The most active member were analysed in...

This study portrays bacterial and archaeal community composition over five summers in the Arctic Fram Strait (80°N). The dataset includes 16S rRNA gene amplicons derived from...

Under the Atlantic Zone Monitoring Program, Fisheries &amp Oceans Canada conducts bi-annual oceanographic monitoring cruises to characterize conditions at established...

We sampled corals Siderastrea siderea and S. radians in the Florida Keys at 4 sites, which consisted of paired inshore-offshore reef zones, throughout 2015-2018. We conducted...

During expedition M157 in the Benguela Upwelling System (BUS) off the coast of Namibia we used a multidisciplinary approach to examine relationships between physical forcing,...

environmental DNA metabarcoding sequences from sea water collected off Santa Cruz Island, CA, USA . Full description of the data set is available at...

A collection of seawater, sea ice and sediment samples from the Arctic Ocean was used for assessing performance of two universal primer sets in representing bacterial diversity...

Multi-marker sequencing of eukaryotic plankton (>10 micron) along the Newfoundland Shelf surface waters taken during the 2019 Autumn Atlantic Zone Monitoring Program (AZMP)...