97 datasets found

The Red Sea is a unique marine ecosystem with contrasting gradients of temperature and salinity along its north to south axis. It is an extremely oligotrophic environment that...

Bacterioplankton metacommunity structure across thermal effluent gradients

microbial biogeography

We determined fungal communities' community structure, diversity and potential functions based on the ITS rRNA gene sequencing to evaluate the overall microbial properties...

Six eDNA samples from a small citizen science program capture biodiversity patterns in the coastal region: a case study using fish eDNA metabarcoding

A surprising recent observation is that one of the smallest types marine phytoplankton, picocyanobacteria of the genus Synechococcus, can contain concentrations of silicon...

Detection of marine organisms based on environmental DNA (eDNA) has resulted in more detailed knowledge of their diversity, distribution, and appearance patterns. In combination...

In this project, we aimed at investigating the impact of Phaeobacter inhibens wildtype and two mutants with mutations in the TDA and AHL regulator protein, respectively, on...

Microbial community structures in urban rivers in Japan were analyzed by 16S rRNA gene amplicon sequencing.

Understanding the structural and functional patterns of bacterial communities in rivers along environmental gradients is crucial in plateau ecology. This study investigated...

Three large mesocosms (~50000 L) were deployed in the New Caledonia lagoon to study the fate of diazotroph-derived nitrogen in the microbial food web over three weeks. Mesocosms...

Sequencing of amplicon and metagenome samples from the main OSD event, representing joint effort of marine sampling stations around the world. The OSD campaign aims to analyze...

16S rRNA gene sequencing of 3-0.22 micrometer fraction and metagenome sequencing of 0.22 micrometer filtrate containing viruses for a monthly time-series 18 seawater samples...

Class 1 integron gene cassettes amplified from DNA extracted from urban rivers in Japan were determined by Nanopore sequencing.

Mifish Metabarcoding from 1.5L water for comparing two extraction methods

For the initial time, we implemented eDNA metabarcoding to evaluate the ecological characteristics of fish populations in a river affected by a mud volcano using 16S marker for...

Illumina sequencing of microeukaryotes across the continental shelves of China to show the latitudinal space-scale-dependence of assembly processes in different trophic groups.

Persian Gulf hosts ca. 48% of the known world oil reserves. This environment is highly exposed to hydrocarbon pollution mainly due to intensive oil exploitation and trafficking....

Usinsky Bay is a freshwater estuary about 50 km long, formed as a result of flooding of the lower section of the Usa River valley after the construction of the Kuibyshev...

In this project, we determined the genome sequence of an inbred strain of Ciona intestinalis (type A also called Ciona robusta).