58 datasets found

The Kew Tree of Life Explorer allows users to explore evolutionary trees of life and to access the genomic data that underpin them. It is an output of the Plant and Fungal Trees...

Part of the Vertebrate Genome Project, fish study. This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the...

to investigate the chlorophenol-respiring bacteria and putative rdhA and to understand the role of different MP types during the anaerobic dehalorespiration with 2,4,6-TCP.

Amplicon sequencing of metabolic marker genes provides targeted snapshots of community metabolic potential. However, inferring microbial taxonomy from metabolic marker gene...

This study is a comparison of marine environmental and marine mock community samples amplified with different versions of a commonly used universal forward primer 515. A...

Microbial activity in the deep sea is cumulatively important for global elemental cycling yet is difficult to quantify and characterize due to low cell density and slow growth....

The Kew Tree of Life Explorer allows users to explore evolutionary trees of life and to access the genomic data that underpin them. It is an output of the Plant and Fungal Trees...

"Short time-scale observations are valuable for understanding microbial influence on nutrient and energy cycles. We assessed dynamics in relative abundance and potential...

This study focuses on human impacts on the microbial community in the San Pedro Channel, California, USA. Surface water was collected from the Port of Los Angeles, Two Harbors...

We are testing new wet-lab protocols designed to sample long reads, linked reads, Hi-C libraries, and cDNA libraries, all from single meiofaunal (<1 mm) specimens. This data...

Phytoplankton (16S, 18S), Bacterial, Archaeal dynamics at SPOT at daily resolution

The USC Microbial Observatory (Jed Fuhrman and David Caron, PIs) focuses on exploratory investigation of prokaryotic and unicellular eukaryotic diversity in the San Pedro...

from a manuscript in prep: "Viruses are thought to influence microbial community structure by density-dependent, host-specific infection, which can be strain-specific....

air samples

Metabarcoding data of soil and liter collected in four localities across Brazilian Amazonia, using 16S ando 18S markers.

These Illumina data are meant to support ongoing assemblies of mostly meiofaunal invertebrate genomes and transcriptomes undertaken by CEL WGS samples will be used for error...

The Kew Tree of Life Explorer allows users to explore evolutionary trees of life and to access the genomic data that underpin them. It is an output of the Plant and Fungal Trees...

DNA extracted from 16 cases of infectious keratitis, as well as 4 control corneas with no known infection, was sequenced to detect pathogenic and non-pathogenic organisms. All...

Extracellular vesicles (EVs) are lipid-bilayered particles released by cells from all the domains of life for multiple functions, exerted both intra- and inter-kingdom. In...

This study will generate genomes for individual marine and estuarine free-living nematodes within the Chromadorea and Enoplea. Single worms will be digested to generate long...