Individual codes, GenBank accession numbers and GenBank accession links for Mediterranean sponges

DOI

Metabolomic analysis has shown the chemical richness of the sponge-associated actinomycetes Streptomyces sp. SBT349, Nonomureae sp. SBT364, and Nocardiopsis sp. SBT366. The genomes of these actinomycetes were sequenced and the genomic potential for secondary metabolism was evaluated. Their draft genomes have sizes of 8.0, 10, and 5.8Mb having 687, 367, and 179 contigs with a GC content of 71.6, 70.7, and 72.7%, respectively. Moreover, antiSMASH 3.0 predicted 108, 149, and 75 secondary metabolite gene clusters, respectively which highlight the metabolic capacity of the three actinomycete species to produce diverse classes of natural products.

Supplement to: Horn, Hannes; Cheng, Cheng; Edrada-Ebel, RuAngelie; Hentschel, Ute; Abdelmohsen, Usama Ramadan (2015): Draft genome sequences of three chemically rich actinomycetes isolated from Mediterranean sponges. Marine Genomics

Identifier
DOI https://doi.org/10.1594/PANGAEA.855521
Related Identifier https://doi.org/10.1016/j.margen.2015.10.003
Metadata Access https://ws.pangaea.de/oai/provider?verb=GetRecord&metadataPrefix=datacite4&identifier=oai:pangaea.de:doi:10.1594/PANGAEA.855521
Provenance
Creator Horn, Hannes ORCID logo; Cheng, Cheng; Edrada-Ebel, RuAngelie ORCID logo; Hentschel, Ute (ORCID: 0000-0003-0596-790X); Abdelmohsen, Usama Ramadan ORCID logo
Publisher PANGAEA
Publication Year 2015
Rights Creative Commons Attribution 3.0 Unported; https://creativecommons.org/licenses/by/3.0/
OpenAccess true
Representation
Resource Type Supplementary Dataset; Dataset
Format text/tab-separated-values
Size 21 data points
Discipline Earth System Research
Spatial Coverage (24.520 LON, 36.770 LAT)