River Thames eDNA temporal metabarcoding study: Illumina MiSeq Raw Sequence data

DOI

The file "Temporal_eDNA_GC-EC-9225.tar.gz" contains raw sequencing metabarcoding data of Thames fish communities. These are 12S data generated using MiFish-U primers (Miya et al., 2015) for 576 filtered water samples collected from two sites from the Thames Basin, London, U.K. Site 1. River Lee (freshwater) and site 2. Richmond Lock, Thames River (tidal). Samples were collected over a year (2019), sampling a minimum of every week providing a detailed temporal dataset.

For further information on the generation of sequence data see the published paper.

Hallam J, Clare EL, Jones JI, Day JJ. (accepted) Fine-scale environmental DNA metabarcoding provides rapid and effective monitoring of fish community dynamics. Environmental DNA 

Identifier
DOI https://doi.org/10.5522/04/23684610.v1
Related Identifier https://ndownloader.figshare.com/files/41562300
Metadata Access https://api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=oai:figshare.com:article/23684610
Provenance
Creator Hallam, Jane; Clare, Elizabeth; Jones, John Iwan; Day, Julia ORCID logo
Publisher University College London UCL
Contributor Figshare
Publication Year 2023
Rights https://creativecommons.org/publicdomain/zero/1.0/
OpenAccess true
Contact researchdatarepository(at)ucl.ac.uk
Representation
Language English
Resource Type Dataset
Discipline Biospheric Sciences; Ecology; Geosciences; Natural Sciences