CalCOFI_NCOG_2020_&_Beyond Metagenome

Sampling for the The NOAA CalCOFI Genomics Program (NCOG) timeseries consists of whole water samples filtered onto 0.2 um filters for DNA and RNA have been collected at CalCOFI and CCE-LTER stations from 10m, the subsurface chlorophyll maximum layer, 170m and 515m since 2014. A subset of these samples has been used for 16S V4 and 18S V9 and V4 rDNA metabarcoding and total mRNA sequencing. Here we deposit 16S, 18SV9, 18SV4 and metatranscriptomics data from 2020 and beyond.

Identifier
Source https://data.blue-cloud.org/search-details?step=~012A965A484B31EAFB8840A458E7B403BF9D3B3980A
Metadata Access https://data.blue-cloud.org/api/collections/A965A484B31EAFB8840A458E7B403BF9D3B3980A
Provenance
Instrument Illumina MiSeq; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Contributor J. Craig Venter Institute
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (-125.769W, 30.416S, -117.278E, 37.280N)
Temporal Coverage Begin 2020-01-05T00:00:00Z
Temporal Coverage End 2020-10-23T00:00:00Z