Whole genome sequencing of Parastichopus tremulus

Parastichopus tremulus is a common holothuroid in the North Atlantic ocean. P. tremulus sea cucumbers can be found from around 20 meters with the majority of the population at about 200-400 meters. It is an underutilized species with great commercial potential. Moereforsking (MF) is in the forefront of research on P. tremulus, both on farming and development of high value products. By using P. tremulus as a model organism the project goals were to establish molecular and bioinformatic tools for sustainable development of marine resources and health related research in Moere and Romsdal. This effort included whole genome sequencing of P. tremulus using single molecule sequencing. The research infrastructure and methods in biotechnology established at Moerelab in the project enables MF to participate in new areas of research.

Identifier
Source https://data.blue-cloud.org/search-details?step=~012BEE22FF3A1BDF6E16718AFB50363A9B8E9A5578A
Metadata Access https://data.blue-cloud.org/api/collections/BEE22FF3A1BDF6E16718AFB50363A9B8E9A5578A
Provenance
Instrument MinION; OXFORD_NANOPORE
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (6.180W, 62.580S, 6.980E, 62.700N)
Temporal Coverage Begin 2021-04-01T00:00:00Z
Temporal Coverage End 2022-09-01T00:00:00Z