Chelonia mydas Transcriptome or Gene expression or WGS or eDNA or Caretta caretta or Lepidochelys kempii or Dermochelys coriacea

In order to gain a better understanding of the biology, triggers, and viral dynamics surrounding Fibropapillomatosis (FP) tumors in the green sea turtle, Chelonia mydas. FP tumors were surgically removed from juvenile green sea turtle patients as part of their rehabilitative care. Transcriptional profiles were generated in order to compare global gene expression to that of biopsies from non-tumored areas of the same turtles. Whole genome sequencing was used to generate mutational signature profiles to understand mutational differences driving tumorigenesis compared to non-tumor tissues. -RNA-seq -DNA-seq (WGS) - eDNA metagenomics

Identifier
Source https://data.blue-cloud.org/search-details?step=~012EB20DA5D06CC1F9B9271D4218464846015FB0624
Metadata Access https://data.blue-cloud.org/api/collections/EB20DA5D06CC1F9B9271D4218464846015FB0624
Provenance
Instrument Illumina NovaSeq 6000; Illumina HiSeq 3000; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (-97.172W, 25.586S, -81.214E, 30.121N)
Temporal Coverage Begin 2014-01-01T00:00:00Z
Temporal Coverage End 2020-09-17T00:00:00Z