Analysis of SNP variation in candidate genes to identify genes associated with adaptation to exposure to wastewater treatment work effluents.

To overall aim of the project is to examine whether exposure of roach populations to estrogenic wastewater (WwTW) effluents over multiple generations has resulted in genetic selection and the impacts of selection on the susceptibility in male fish to develop oestrogen-induced effects associated with negative fitness consequences. Specifically these genomic sequences were generated to identify genomic regions associated with single nucleotide polymorphisms -SNPs identified from transcriptome sequencing from wild fish. These data will then be used to test whether candidate genes have signatures of selection in roach populations confined to rivers with a high proportion of estrogenic effluent.

Identifier
Source https://data.blue-cloud.org/search-details?step=~01221E05C493C8C74E6C4FEB814F94CCF81CB97B983
Metadata Access https://data.blue-cloud.org/api/collections/21E05C493C8C74E6C4FEB814F94CCF81CB97B983
Provenance
Instrument Illumina HiSeq 2500; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Contributor UNIVERSITY OF EXETER
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Point 2016-07-26T00:00:00Z