polychaetous annelids genomic Raw sequence reads

We present a detailed analysis of TE scans on low-coverage genomes from 15 polychaetes. We then characterized the clades defined by 1021 LTR-retrotransposon families identified in 26 species. Clade richness was highly dependent on the considered superfamily. Copia elements appear rare and are equally distributed in only three clades, GalEa, Hydra and CoMol. Among the eight BEL/Pao clades identified in annelids, two small clades within the Sailor lineage are new for science. We characterized 17 Gypsy clades of which only 4 are new the C-clade largely dominates with a quarter of the families.

Identifier
Source https://data.blue-cloud.org/search-details?step=~012DED8D21F0A13B1DC928E3036C03124BD6E1A6EF8
Metadata Access https://data.blue-cloud.org/api/collections/DED8D21F0A13B1DC928E3036C03124BD6E1A6EF8
Provenance
Instrument Illumina HiSeq 2000; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (9.440W, -5.460S, 9.440E, -5.460N)
Temporal Coverage Begin 2009-01-01T00:00:00Z
Temporal Coverage End 2019-01-01T00:00:00Z