VqmR sRNA target identification

In this study, we determined the target spectrum of the VqmR sRNA via vqmR pulse-expression followed by RNA-sequencing. Overall design: mRNA profiles of V. cholerae dvqmR strains carrying pBAD-ctr (empty vector control) or pBAD-vqmR (inducible sRNA expression vector). The bacteria were grown to exponential phase, expression of vqmR was induced by addition of L-arabinose, and RNA-samples were taken 15 minutes after induction. Three independent biological replicates for each condition are provided.

Identifier
Source https://data.blue-cloud.org/search-details?step=~0122C10F0D9A07E214CBF55C6033EC60F7F0113D60C
Metadata Access https://data.blue-cloud.org/api/collections/2C10F0D9A07E214CBF55C6033EC60F7F0113D60C
Provenance
Instrument Illumina HiSeq 1500; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Contributor AG Papenfort, I, Microbiology, Ludwig-Maximilians-Universität München
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Point 2018-06-26T00:00:00Z