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Characterization of Eukaryotic Microbial Communities associated to Antarctic ...
V4 amplicon of 18S rRNA from Antarctic sponge -
Lepeophtheirus salmonis salmonis breed:LsGulen Raw sequence reads
The salmon louse (Lepeophtheirus salmonis), an ectoparasitic copepod on salmonids, has become a major threat for the fish farming industry. In search for new drugs and vaccines... -
Metagenomic sequences of the Ofunato Bay 2016
The Ofunato Bay in Iwate Prefecture, Japan, is a deep coastal bay located at the center of the Sanriku Rias coast and considered an economically and environmentally important... -
Combined omics in the marine sponge Aplysina aerophoba
The data deposited in this study come from whole-tissue samples from the marine sponge Aplysina aerophoba and associated microorganisms. Shotgun HiSeq sequencing (Illumina) was... -
The restrcuted NC10 bacteria genomes from diverse deep-sea environments and e...
The restrcuted NC10 bacteria genomes from diverse deep-sea environments and estuary waters -
Heterologous Genetic complementation of Thermococcus barophilus
the goal of this project is to demonstrate the functional heterologous complementation of DNA repair enzymes between two Thermococcales species. The model species are... -
metaT
Data deposited here are raw sequences produced for the following paper: Wutkowska M., Vader A., Logares R., Pelletier E., Gabrielsen T.M., 2023, Linking extreme seasonality and... -
Tijuana River pollution at Imperial Beach 2019
Rain events increase Tijuana river flow to levels that the international water treatment plant in the Mexico-US border can not process. Therefore, rain runoff and sewage... -
Coral eDNA project
The foundation of coral reefs, the most biodiverse area on Earth, are formed by anthozoan cnidarians, scleractinian corals. Recently however, ongoing climate change has... -
The sponge microbiome in deep-sea environment
The project aims at the study of genomes of sponge symbionts in deep-sea environments, exploring their ecological and evolutionary roles. -
whole genome survey sequencing of stonefish Minous monodactylus
The reported genomic data and genetic markers in this study could be useful in future comparative genomics and evolutionary biology studies. -
Patterns of microbiome transition along salinity gradients, and importance fo...
We are interested in whether the host fish microbiome is important for host adaptation to alternate osmotic niches. Toward this goal, we seek to describe the patterns of... -
Developing a protocol, DNA extraction and pipelines for taxonomical assingmen...
Six DNA extraction methods were tested in pure cultures of different nano and picoplankton species. The same extractions were checked in non-axenic mock communities formed... -
Pseudoalteromonas phenolica strain:KCTC 12086 Genome sequencing and assembly
Genome sequencing of Pseudoalteromonas phenolica using PacBio sequencing platform -
Triplicate PCR reactions for 16S rRNA gene amplicon sequencing are unnecessary
Conventional wisdom holds that PCR amplification for sequencing should employ pooled replicate reactions to reduce bias due to jackpot effects and chimera formation. However,... -
Rio de Janeiro Coastline
Although Brazil is well known for the great biodiversity within its flora and fauna, the microbial diversity has been poorly characterized. The geographic formation of Rio de... -
Microbiome profiling and prediction of antibiotic resistance genes in untreat...
This dataset has no description
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coral reef metagenome Raw sequence reads
Coral microbiome metagenome from two Hawaiian reef-building corals: Montipora capitata and Pocillopora acuta. -
Arctic microbiome along Svalbard Cross Shelf transects (2017 Campaign)
Microbiome analysis of seawater samples collected at stations along Svalbard Cross Shelf transects (Kongsfjorden and Rijpfjorden), at different depths, based on V4-V5 16S rRNA... -
Microbiota profiles in the gills of coastal shellfish
Recently, it has been explored that chemosynthetic bacteria in gills of some bivalves living in shallow water have abilities of fixing nitrogen and synthesizing amino acid for...
