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Primordially conserved principles of IgT in mucosal pathogen control and micr...
Teleost fish a mucosa-associated lymphoid tissue (MALT) that lacks organized structures. Teleost mucosal surfaces are colonized by a diverse microbiota and fish produce... -
xenomicrobiota_transplanted_into_germfree_mice
Xenomicrobiota from a variety of different environments were transplanted into germfree mice. Assembly and composition of the gut-selected communities were analyzed by... -
Gut bacterial communities of common carp
To analyze the influence of dietary tributyrin on the gut bacterial communities in common carp, the bacterial community structure was assessed by Miseq sequencing. -
RNA-seq of discus fish
This is RNA-seq of discus fish. -
Whole genome metagenomics of fermented fish Napham via Next Gen Seq
The name of the sample is Napham. It is a Fermented fish product in paste form which is traditionally prepared by Bodo ethnic community of Assam, BTR. In different stages of... -
Fish gut metagenome Metagenome
16S sequencing of field sampled Gasterosteus aculeatus that either appear non-infected or were parasitized with Schistocephalus solidus -
Gut microbiota ontogeny of the discus fish fry (Symphysodon aequifasciata)
The goal was to document the gut microbiota ontogeny of a progeny of skin mucus-feeding discus fry during 100 days post-hatching. The V4 16S rRNA gene was sequenced to assess... -
liver metagenome
Continuous heat stress is a common problem in eel (Monopterus albus) culture production. To investigate the effects of such stress on the growth and health of eels. -
Ichthyoplankton metabarcoding: an efficient tool for early detection of invas...
In this study, we used DNA metabarcoding of bulk samples of early life-stage fishes to analyze species composition and monitor invasive fishes in four major rivers in southern... -
Characterization of the gill and gastrointestinal microbiota of NEW GIFT stra...
To characterize of the gill and gastrointestinal digesta- and mucosa-associated microbiota of NEW GIFT strain of farmed adult Nile tilapia (Oreochromis niloticus) by Illumina... -
Species in Fish meal from Urban Fisheries Biomass
Fastq files of MiFish and MiFish-tuna libraries constructed from extracted DNA in fish meal (FM) from urban fisheries biomass (UFB) in Japan collected from October 2020 to... -
Microbial community isolated from fish slime layer
Microbial community was isolated May 4, 2006, from the slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA) (33.537594, -116.097751). The fish showed no sign of... -
planktonic and intestinal bacteria
planktonic and intestinal bacteria -
Viral community isolated from fish gut contents
Viral community was isolated May 4, 2006, from the gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA) (33.537594, -116.097751). The fish showed no sign of... -
Taxonomic and Functional characteristics of the gut and gill microbiota of he...
To identify the composition of intestinal bacteria of healthy and diseased Nile tilapia by Next Generation Sequencing (NGS). To reveal the differences of gut microbiota between... -
Effect of microbiota on acclimation of fishes to new ecosystems
This study aimed to develop and employ a replicable approach to investigate shifts in microbiota structure and innate immune parameters during wild acclimation of juvenile... -
Bacterial communities of carp (Cyprinus carpio) from Lake Karla
Microbiota of carp (Cyprinus carpio) from Lake Karla, Central Greece -
Bacterioplankton dynamics on fish mucus, gut and feces Targeted Locus (Loci)
This aim of this study was to investigate the distribution of bacterioplankton OTUs on fish mucus and in fish gut and feces, as well as differences in such dynamics between fish... -
fish_related environments_microbiome
Gut microbiota has become an integral component of the host, and exerts on host biology. Due to its importance, host intestinal bacterial community has received more and more... -
fish_primer Targeted loci environmental
We designed new universal primers for freshwater fish by analyzing the whole mitochondrial genome of Chinese freshwater fish.The results will help with primer design and...
