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Whole genome mapping of DNA G-quadruplexes in multiple species by G4-seq
The identification of DNA G-quadruplexes (G4s) in the genome is important to study different biological processes in which these structures play a role, such as genome... -
Small RNA sequencing of the 8 to 30-nucleotide window from various samples
RNA-sequencing (RNA-Seq) protocols and bioinformatic pipelines are designed to streamline downstream analyses on sequences believed to be the most important. Here, we have... -
Calibrated ribosome profiling assesses the dynamics of ribosomal flux on tran...
Ribosome profiling, which is based on deep sequencing of ribosome footprints, has served as a powerful tool for elucidating the regulatory mechanism of protein synthesis.... -
High-resolution quantitative profiling of tRNA abundance and modification sta...
Measurements of cellular tRNA abundance are hampered by pervasive blocks to cDNA synthesis at modified nucleosides and the extensive similarity among tRNA genes. We overcome... -
Error correction tool benchmark
This project compares the performance of different hybrid error correction tools. -
Origin and Evolution of Neural Microexons
Our study focuses on the origin of the neural microexon program.</p><p>We discover that neural microexon programs are present in non-vertebrate... -
Pacific Biosciences Model Organism Genome Sequencing
DNA from three model organisms (Yeast, Flowering plant, and Fruit Fly) have been sequenced and de novo assembled using the PacBio RS II insrument -
Replication Data for: Cryptic female choice in response to male pheromones in...
The dataset contains all raw data and a statistics summary sheet used to produce the figures and supplementary figures of the paper. There is one excel sheet per figures. -
Supplementary Files for "Pleiotropy modulates the efficacy of selection in Dr...
File S1. Variant Calling Format file of the ingroup: 197 haploid sequences of D. melanogaster from Zambia (Africa) aligned to the D. melanogaster 5.57 reference genome. File S2.... -
Supplementary Files for "Pleiotropy modulates the efficacy of selection in Dr...
File S1. Variant Calling Format file of the ingroup: 197 haploid sequences of D. melanogaster from Zambia (Africa) aligned to the D. melanogaster 5.57 reference genome. File S2.... -
Replication Data for: Social modulation of oogenesis and egg-laying in Drosop...
The dataset contains all the raw data and R-script used to produce the figures in the paper. The Excel document named ‘Raw data.xlsx’ contains the raw data and is composed of... -
Replication Data for: Resident group size modulates oviposition site selectio...
The data repository contains all raw data associated with the publication, the R-script to process the data and a Python script to proces the videos. Abbreviations in data... -
Replication Data for: Thermosensory perception regulates speed of movement in...
Data Files: Output from fly tracker that contain the following columns: Column 1: Frame in video Column 2: On/Off status of left red LED Column 3: On/Off status of right red LED... -
Replication Data for: Lack of alignment across yeast-dependent life history t...
The dataset contains all raw data and R-script used to produce the figures in the paper. Data is organised in Excel sheets per figure, file names are self-explanatory. -
Replication Data for: Mating increases Drosophila melanogaster females’ choos...
The repository contains all raw data, R-scripts and a statistics summary sheet. The repository contains all raw data, R-scripts and a statistics summary sheet
