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BiotopeBac: a curated database and source tracker tool to infer bacterial bio...
16S amplicon sequencing datasets for the optimization of the BiotopeBac tool. -
Pig lung-Environment Bacterial Communities
Previous studies of the lung microbiome have focused on characterizing the community and attempts to understand the role of community membership concerning disease or exposures... -
Bacteria and yeast involved in red-browning defect in smear cheese
This study is focused on the characterisation of microbiota in red-spoiled (n=6) and not-spoiled cheeses (n=6), and onto the wooden shelves (12) used for ripenning. -
Gut microbiota of Pacific abalone and a hybrid abalone
These sequencing include the 16S rRNA raw sequencing data of gut microbiota of 30 Pacific abalones and 30 hybrid abalones. And the 16S rRNA raw sequencing data of 5 water column... -
fangzhiwei
Food allergies (FAs) are a crucial public health problem and a severe food safety issue, resulting in an urgent need for an accurate method to detect the hundreds of allergens... -
Multi-dimensional investigation and distribution characteristics analysis of ...
More than one hundred of fish species have been cultured in many fish farms along 3752 kilometers coastline of Fujian Province in South China. This would be a good model for... -
Larval Northern Pike Gut Microbiota Raw sequence reads
An experiment was set up to determine the effect that diet has on the gut microbiota of larval Northern Pike. Of great interest was determining the importance of initial diet,... -
The microbiota on western clawed frog gut, food and ambient water
Aan experiment under controlled laboratory conditions was performed with Xenopus tropicalis. The relationship of microbiota among host, ambient water and food was explored. -
European Sea Bass Supplementation with Chitinolytic Probiotics
Recognized for its high nutritional value and minimal environmental impact, insect meal (IM) has gradually found its way into fish dietary regimes. However, exceeding 15%... -
Yunlong Grouper Raw sequence reads
We research using 16S rRNA gene sequencing to analyze the intestinal microflora of Yunlong Grouper in different health states, and studies of the correlation between composition... -
sea cucumber pioneer microbiome
The dynamics and contribution of pioneer microbiota of marine invertebrates are largely unknown due to a lack of experimental models. To know pioneer microbiomes and/or first... -
Temporal dynamics of Atlantic salmon skin and gill mucosal microbiomes in FW ...
As the global population continues to increase, so to does the need for a sufficient and sustainable source of protein for human consumption. In line with this need, aquaculture... -
Inclusion of digestible carbohydrates in combination with a total plant-based...
These 16S sequencing data are from the project to study the impact of a 100% plant-based diet with dietary carbohydrates on the microbiota and metabolism of rainbow trout. The... -
potable water, wastewater, soil , cucumber surface and puree, and melon puree...
Using treated wastewater (TWW) for irrigation could alleviate potable water (PW) stress and provide food security in arid environments. However, TWW irrigation could present a... -
Characterization of bacterial diversity on gut, gill, and skin mucosa of Atla...
V3V4 16S rRNA gene sequencing was conducted to characterize the mucosal microbiota on the gill, gut, and skin of Atlantic salmon. The influence of functional feed ingredients... -
MicroLarvE
Study of active microbial communities associated with larvae of Litopenaeus stylirostris and with rearing water during larval rearing in shrimp hatcheries -
Temporal dynamics of Atlantic salmon hindgut microbiome in FW RAS and post-SWT
As the global population continues to increase, so to does the need for a sufficient and sustainable source of protein for human consumption. In line with this need, aquaculture... -
Major food bacterial pathogens in the united states and around the world, inc...
University of California at Davis 100K Pathogen Genome Project. Major bacterial pathogens in the United States and around the world, including Salmonella enterica, E. coli,... -
fish_related environments_microbiome
Gut microbiota has become an integral component of the host, and exerts on host biology. Due to its importance, host intestinal bacterial community has received more and more... -
food metagenome Raw sequence reads
fermented sausage