173 datasets found

Liver RNA-seqencing of common Pekin, Muscovy, mule and hinny ducks fed ad libitum or overfed

To identify putative secreted proteins in the M. incognita protein set (Blanc-Mathieu et al. 2017), we searched for predicted signal peptides (SP) for secretion using SignalP v4...

Submission file of Legumes botanic family (16 proto-chromosomes) in PlantSyntenyViewer

The FeedOmics project aimed to determine biomarkers of feed efficiency in growing pigs. Here, the files refer to learning and validation databases including transcriptomes of...

Fusarium graminearum is one of the most frequent causal agent of the Fusarium Head Blight in the world, a cereal disease spread throughout the world, reducing grain production...

After running the TEdenovo, we got a filtered library (without the SSR consensus and without the unclassified consensus if they were generated with less than 10 HSPs). We have...

Annotated list of the 63 species used in the Orthofinder comparative analysis of nematodes (61 species) and two tardigrade species as out-groups. Description: Lines 1-64,...

Botrytis cinerea, the grey mould fungus, is a plant pathogen with a necrotrophic lifestyle causing serious pre- and post-harvest diseases on a variety of plant species...

Positive mode LC-MS metabolomic profiling of 15 DPA, 20 DPA, 25 DPA and Red Ripe fruit pericarp from the WT, gbp1-c4 and gbp1-c8 independent mutant lines of tomato.

Projet Diat ADN Transfert Transfert vers l’opérationnel de l’outil « diatomées ADN » pour le contrôle de la qualité des milieux aquatiques Livrable : Outils pédagogiques pour...

Accession numbers of M. incognita predicted proteins having predicted homologs only in other plant-parasitic nematodes (PPN) or being M. incognita-specific.

Method followed to obtain the Rsyst::diatom_rbcl_align_312bp database: 1/ Extraction of the 312bp rbcL barcode from the full Rsyst::diatom database rbcL alignment (using...

this dataset provides the results of the de novo assembly and annotation of RNA-seq data from the mycoheterotrophic orchids Neottia nidus-avis and Epipogium aphyllum. For each...

This database is an adaptation for DADA2 of : Vasselon, Valentin; Rimet, Frederic; Bouchez, Agnès, 2018, "Rsyst::diatom_rbcl_align_312bp database: a database adapted to DNA...

This article describes how RNA expression data of 173 genes were produced on 384 sunflower hybrids grown in field conditions. Sunflower hybrids were selected to represent...

This data file consists of genotypes of 732 animals for 41183 markers. The animals belong to 23 populations. The file is a "csv" file where the field separator is ";". First...

This pipeline performs a de-novo genome assembly, identifies single copy genes in the genome, and designs several pools of pair of primers for amplifying regions of these genes...

Submission file of Rosaceae botanic family (9 proto-chromosomes) in PlantSyntenyViewer

This intensive study plot is located in Villenave d’Ornon, near Bordeaux in southwestern France (44.788319 N, -0.577062 E). It includes the INRAE chestnut germplasm collection...

Gene Set Enrichment Analyses (GSEA) and Differentially Expressed Genes (DEG) defining the molecular profiles of bovine blastocysts produced in vitro