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Clinical evaluation of mNGS in unbiased pathogens diagnosis of UTIs
Advance the implementation of mNGS in pathogen diagnosis in clinics. -
Bacteria and yeast pathogens sequenced from human blood culture specimens
Bloodstream infection is a major cause of morbidity and mortality worldwide. Early pathogen detection and administration of appropriate antimicrobial therapy substantially... -
Optimization and Sensitivity Analysis of a rapid LAMP-based detection method ...
This research was supported and funded by the Philippine Council for Agriculture, Aquatic and Natural Resources Research and Development-Department of Science and Technology for... -
NIHR_Global_Health_Research_Unit_on_Genomic_Surveillance_of_Antimicrobial_Res...
This project is funded by the UK National Institute for Health Research to set up a full-fledged Global Health Research Unit (GHRU) through a grant awarded to the cGPS (Centre... -
Extremophile Genome Project (EGP)
The aims of EGP are for discovery bacteria and archaea from the extreme environments including genome sequencing and annotation. -
SC PHL pathogens isolated from wastewater samples that are not routine Genome...
Whole genome sequencing of wastewater isolates that do not fall into GenomeTrakr enteric or ESKAPE organisms. -
FDA-CFSAN: microbial foodborne pathogen research
Draft and complete genome sequences of foodborne bacterial pathogens collected for research purposes at the FDA's Center for Food Safety and Applied Nutrition. -
FDA-ARGOS is a database with public quality-controlled reference genomes for ...
<b>FDA-ARGOS project update</b> <p>FDA-ARGOS database updates may help researchers rapidly validate diagnostic tests and use qualified genetic sequences to... -
Influence of silver nanoparticules on microbial communities from the wastewat...
the aim of this study was to clarify the effect of different silver nanoparticules (AgNP) concentrations over the time on microbial communities from a german wastewater... -
Bacterial isolates from Natural Cat Food Diets
WGS of bacterial isolates from Natural Cat Food Diets -
Two weeks in the World 2020
The Two Weeks in the World research project has resulted in a dataset of 3100 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units... -
Indigenous Microbial Communities Modulation in Petroleum Reservoirs by Single...
The modulation of indigenous microbial communities in petroleum reservoirs by exogenous single bacterium -
CDC HAI-Seq Gram-negative bacteria
CDC Division of Healthcare Quality Promotion’s BioProject for whole genome sequence data of Gram-negative bacteria -
Gammaproteobacteria Raw sequence reads
A collection of Gammaproteobacteria isolated from environmental and patient sources originating from a single hospital in the United States -
Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support... -
Bacterial isolates from intensive care units
Whole genome sequencing of bacterial isolates over a 1-year period from a hospital's intensive care units. -
Enterobacterales, Acinetobacter spp, Burkholderia spp, Pseudomonas spp, Steno...
Prospective collection and sequencing of positive blood culture isolates in hospitalized adults in Cambodia -
ICUUKseq_GNB
The emergence and spread of antimicrobial resistance (AMR) poses a significant challenge to the safe delivery of modern medical care. Multidrug-resistant organisms (MDRO) are... -
Bacterial isolates from patients attending regional referral hospitals in Tan...
Miscellaneous bacterial isolates collected at six regional referral hospitals in Tanzania in 2020-2021. The "ESKAPE pathogen" isolates from this project were published in...