173 datasets found

Analyses performed on 18 genetically-diverse hybrids using leaf methanolic extracts.

Open and shared thesaurus covering INRAE's research fields. It serves as a repository within the institute to index and annotate documents, web pages, activity descriptions and...

Data management plan of the Plant Bioinformatics Facility (PlantBioinfoPF), hosted at URGI. Copyrights: The creator(s) of this plan accept(s) that all or part of the text may be...

In the context of the FeMAI project (Federated Microbiome AI for human health), this dataset was created to assess various machine learning classification methods for colorectal...

Plan de gestion des données de l'UMR INRAE BIOGECO Ce document explicite la manière dont sont obtenues, documentées, analysées, disséminées et archivées les données produites...

Dataset overview This dataset provides: the updated Integrated Gene Catalog of the human gut microbiota (aka IGC2) 1,989 Metagenomic Species Pangenomes (MSPs) This dataset...

Diatoms (Bacillariophyta) are ubiquitous microalgae which produce a siliceous exoskeleton and which make a major contribution to the productivity of oceans and freshwaters. They...

This dataset includes generated genome annotation for the 17 strains as Data S1, and comparative statistics and orthogroup analyses for these genomes, performed using...

This dataset corresponds to the genotypic data associated with the study: " Genetic diversity of maize landraces from the South-West of France " by Diaw et al. (2021). The data...

Different Variant data set combining genotypic data data from the newly sequenced strains and data from available genomes sequences obtained at SGD. Data at vcf format or at...

The data management plan of the infrastructure concerns three types of data: • Data-U: user data stored on working spaces assigned to user and project accounts. •...

R code used to perform the network inference and analysis of "Microbial networks inferred from environmental DNA data for biomonitoring ecosystem change: strengths and pitfalls"

These scripts implement the combined test for feature selection in a multi-class comparison from data with missing values, presented in Plancade, Berland et al (2022). The test...

This dataset provides the results of two systematic large-scale yeast two-hybrid screenings of the Arabidopsis thaliana InterATOME library with the Arabidopsis...

The plasma's proteomics data obtained from Holstein cows treated with abomasal infusions of coconut oil (CTRL) or a mixture of essential fatty acids and conjugated linoleic...

General statistics of the orhofinder analysis on the 63 species (including 61 nematodes). Number of orthogroups, of genes in orthogroups etc...

This dataset corresponds to the data and code associated to the study: "Improving genomic predictions with inbreeding and non-additive effects in two admixed maize hybrid...

Raw and annotated Orthofinder results on 61 nematode and 2 tardigrade (used as outgroup) species. The annotated list of species with description of the abbreviated names is...

Impact of atmospheric stresses on clouds microorganisms metabolism: the case of H2O2 Dataset: The dataset contains 32 files created from 500MHz NMR spectrometer and cdf files...

Negative mode LC-MS metabolomic profiling of 15 DPA, 20 DPA, 25 DPA and Red Ripe fruit pericarp from the WT, gbp1-c4 and gbp1-c8 independent mutant lines of tomato.