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Recovery of high-quality assembled genomes via single-cell genome-guided binn...
High-quality (HQ) reference genomes are essential for understanding the phylogeny and function of uncultured microbes in complex microbial ecosystems. However, existing... -
Metagenomic next-generation sequencing for microbial pathogen
This study aims to detect pathogens in bronchoalveolar lavage fluid (BALF) from SCAP patients using both metagenomics extended-spectrum pathogenic microorganism sequencing... -
Shigella Genome sequencing and assembly
Shigella species Genome sequencing and assembly -
Creation of genomic chimeras via megabase scale genome expansion
This SRA project contains raw sequencing data for WGS, Tn-Seq, and whole-transcriptome RNA-Seq of massively expanded synthetic genomes - and associated background strains -... -
Two weeks in the World 2020
The Two Weeks in the World research project has resulted in a dataset of 3100 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units... -
CDC HAI-Seq Gram-negative bacteria
CDC Division of Healthcare Quality Promotion’s BioProject for whole genome sequence data of Gram-negative bacteria -
The isolates from feces in Felidae
The isolates from feces in Felidae -
RNA Atlas of Bacterial Human Pathogens Uncovers Stress Dynamics Linked to Bac...
Pathogenic bacteria encounter a variety of stressful host environments during infection. Their responses to meet these challenges protect them from deadly damages and aid in... -
bacterial multiDAP
Escherichia coli and Pseudomonas simiae transcription factor binding sites mapped in 48 bacterial genomes -
diagnosis of infectious peripheral pulmonary lesions by mNGS
We used mNGS to detect pathogens in matched transbronchial lung biopsy (TBLB), bronchoalveolar lavage fluid (BALF), and bronchial needle brushing (BB) specimens from 39 patients... -
HPACC_Murray_project
http://www.sanger.ac.uk/resources/downloads/bacteria/ This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the... -
Major food bacterial pathogens in the united states and around the world, inc...
University of California at Davis 100K Pathogen Genome Project. Major bacterial pathogens in the United States and around the world, including Salmonella enterica, E. coli,... -
Escherichia, Shigella, Salmonella, Listeria, Campylobacter, Vibrio Raw sequen...
Sequences associated with validation of sequencing reagents and platforms -
Assorted bacteria with public health implications
Bacteria with public health implications due to virulence or antimicrobial resistance. Many of these bacteria were associated with outbreaks or have abnormal characteristics.... -
FDA-ARGOS is a database with public quality-controlled reference genomes for ...
<b>FDA-ARGOS project update</b> <p>FDA-ARGOS database updates may help researchers rapidly validate diagnostic tests and use qualified genetic sequences to... -
Draft genome sequences of transconjugants harboring PromA plasmids
Nucleotide sequences including G+C contents and oligonucleotide compositions tend to be more similar between plasmid and hosts' chromosome than between the plasmid and non-host...