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Biodiversity assessment across the tree of life using environmental DNA in aq...
This project aims to demonstrate the feasibility and reproducibility of bioassessment of organisms across the tree of life in large aquatic ecosystems using PCR-free ultra-deep... -
Bacteria in Norwegian drinking water and water-main biofilms
Bacterial 16S rRNA gene amplicons were sequenced using the Illumina MiSeq platform to investigate DNA samples from three drinking water distribution networks in Norway (Bergen,... -
Whole genome sequencing of CA Central Valley Chinook salmon
In this study, we use whole-genome sequence data to identify diagnostic SNPs for the development of CRISPR-based SHERLOCK assays capable of rapidly, accurately, and sensitively... -
Microbial community structure associated with submarine groundwater discharge
Sequence datasets were collected across hydrological continuum of submarine groundwater discharge sites in Indonesia, USA, and Germany. Microbial community structure was... -
Microbial community structuring by 2-heptyl-4-quinolone (HHQ) during a phytop...
Algicidal infochemicals produced by marine bacteria have the unique ability to influence the structure of prokaryotic and eukaryotic microbial communities simultaneously.... -
Microbial community development in Base Mine Lake, the first end-pit-lake in ...
The goal of this study is to compare the microbial community in the early years of an oil sands end pit lake (named Base Mine Lake or BML) to that of a freshwater reservoir... -
Investigation of Minnesota groundwater bacteria using dead-end ultrafiltration
Groundwater is often a desirable drinking water source because it has low suspended solids and minimal biological activity, often requiring little if any treatment prior to... -
Effects of hyperthermal stress on the gut microbiome of juvenile milkfish (Ch...
Milkfish, an important aquaculture species in Asian countries, are traditionally cultured in outdoor-based systems. There, they experience potentially stressful fluctuations in... -
Monitoring of disease and treatment-induced alterations in the salmon gut mic...
The present study aims to describe, with 16S DNA metabarcoding, the distal gut microbiota of a captive-reared population of juvenile Atlantic salmon (approx. one-year-old) with...