61 datasets found

Environmental monitoring of Krishna Godavari Basin Bay of Bengal

Microbiomes developed in marine-sediment microbial fuel cells treating complex organic matter was analyzed.

In this study we apply metabarcoding and MiSeq sequencing of the V9 18S rRNA region, in order to target the DNA of single foraminiferal cells and their surrounding sediments....

An RNA-stable isotope probing incubation experiment was performed, investigating the actively acetate assimilating or carbon fixating bacterial community under sulfate-reducing...

Comparison of different sample types using different primers and platforms

Benthic bacterial communities composition at submarine natural CO2 vents were investigated to assess the effect of CO2 leakage and consequent seawater acidification on benthic...

Environmental parameters driving the bacterial community structure in shallow and deep sediments of the Perdido Fold Belt Region in the Gulf of Mexico

The aim of this study was to investigate consistencies and divergences between assessment of meiofaunal diversity using molecular and traditional morphological methods.

Understanding the marine sediment microbial community structure is of increasing importance to microbiologists, since little is known of the diverse taxonomy that exist within...

Raw eDNA sequences from seagrass sediments from the Eastern Mediterranean Sea

The data was used to study the bacterial diversity at the DNA level in the core sediments of mariculture area.

archaeal community

Marine sediment microbial communities off the coast of San Francisco, CA, United States

Given the fact that our previous analyses -- see PRJNA248084 -- revealed limited microbial diversity in both domains of life in the central mud flow and that technical artifacts...

A prerequisite for DNA-based microbial community analysis is even and effective cell disruption for DNA extraction. With a commonly used DNA extraction kit, ~80% of subseafloor...

Marine sediment microbial communities off the coast of San Francisco, CA, United States

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Liaohe and Yalujinag estuaries benthic bacterial communities in 2020

the microbial community of the Surrounding Sediments of Polymetallic Nodules from the Mariana Trench.

Data contains raw unprocessed reads of sedimentary DNA from West coast of India GOA. These reads are obtained at four sites using 18 sRNA targeting foraminifera specific barcodes