21 datasets found

This experiment investigated the microbiological profiles of wild oyster habitats at three sites in the North Sea, using 16S rRNA amplicon sequencing and bioinformatic to screen...

Comparison of 16S rRNA oyster microbiomes from six different estuaries in Australia

16S data from Crassostrea virginica, Ischadium recurvum, Ameritella mitchelli, Macoma balthica

Seafood is one of the leading imported products implicated in foodborne outbreaks worldwide. Coastal marine environments are being increasingly subjected to reduced water...

In our lab, we have undertaken the characterization of the entire microbial community (bacteria, protists and viruses) in the hemolymph of the Pacific oysters using global...

bacterial communities associated to healthy and diseased Crassostrea gigas oysters

Oysters in coastal and estuarine environments are subject to fluctuating environmental conditions, including nutrient loading, runoff, pollution, and anoxia, that may impact...

To investigate the dynamics of the oyster microbiota (Crassostrea gigas) in two oyster families after exposure to the infectious environment (Brest, France, July 2015), we...

Mass mortalities caused by Akoya oyster disease (AOD) have been occurring in the cultured Japanese pearl oyster (Pinctada fucata martensii) since 1994. Although several causes...

Oyster (Crassostrea virginica) gut samples from the Northern area of Narragansett Bay. Samples come from enriched and control nutrient level treatments. Sequences include gene...

Olympia Oyster (Ostrea lurida) populations rapidly declined in Washington over a century ago. Currently, there are efforts by the state of Washington DNR to monitor Ostrea...

In this study we examined the microbiome of Crassostrea gigas bred for varying degrees of OsHV-1 microvariant resistance. The adductor muscle microbiome of 175 oysters assigned...

Digestive bacterial communities of Penaeus vannamei and Crassostrea gigas in monoculture and coculture systems

Recently, it has been demonstrated that the Pacific oyster mortality syndrome affecting Crassostrea gigas oysters is caused by multiple infection with an initial and necessary...

The Sydney rock oyster (SRO Saccostrea glomerata) is the most intensively farmed oyster species in Australia however, diseases such as Queensland unknown (QX) disease has caused...

The Vibrio genus is notable for including several pathogens of marine animals and humans, yet characterisation of Vibrio diversity using routine 16S rRNA sequencing methods is...

Oysters play an important role in coastal ecology and are a globally popular seafood source. However, their filter feeding lifestyle enables coastal pathogens, toxins, and...

Oysters naturally harbor the human gastric pathogen Vibrio parahaemolyticus, but the nature of this association is unknown. Because microbial interactions could influence the...

Bacteria-host interactions are universal in nature and have significant effects on host functionality. In the present study, we investigated how the secondary metabolite...

These are amplicon sequence data of 16S and 18S rRNA genes (515FY-926R primers) of oyster larval microbiota. Host 18S genes are included in these data, and make up the bulk of...