20 datasets found

The bacterial community at 2,000-m depth was studied over one-year survey in 2011 at the ANTARES site (Northwestern Mediterranean Sea). The most active member were analysed in...

The grazing activity by specific marine organisms represents a growing threat to the survival of many scleractinian species. For example, the recent proliferation of the...

Arboreal ant species have high population densities and low genetic variability among workers, which should favour a high probability of disease spreading in a colony. However,...

The Two Weeks in the World research project has resulted in a dataset of 3100 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units...

Live copepods from the North Atlantic subtropical gyre were collected and rinsed to be used in bioassay-type experiments. Bacteria present in various seawater and copepod...

A metatranscriptomic library was made of copepods picked from the Bermuda Atlantic Time Series station as well as copepods used in bottle incubation experiments. Expression data...

We have a collection of 19 V. cholerae isolated in the years 2009/2010 from Dadaab refugee camp patients. The V. cholerae are resistant to third generation cephalosporins....

Marine sponges harbor diverse microbiomes that contribute to their energetic and metabolic needs. Although numerous studies on sponge microbial diversity exist, relatively few...

Taxonomic and functional heterogeneity of the gill microbiome in Phacoides pectinatus

Diazotrophs harbored in Acropora millepora early life stages

Samples were collected in order to document the bacterial ribotype (16S rRNA gene) diversity associated with the SML of healthy Montastraea faveolata and Porites astreoides...

Here we present a comprehensive collection of 737 whole-genome sequenced bacterial isolates from humans to understand the blueprint of human gastrointestinal microbiota. This...

Comparison of multiple sources of inocula from thermal and saline environments and fermentation derived communities to improve a second generation biofuels platform using the...

Bacteria are immensely diverse and drive many ecosystem processes. Bacterial biogeography as well as the coupling between bacterial community composition and functioning is...

Evaluating metagenomic software is key for optimizing metagenome interpretation and focus of the initiative for the Critical Assessment of Metagenome Interpretation (CAMI). The...

Complex interactions between microalgae and bacteria, such as mutualism, parasitism and competition, shape the structure and functioning of photosynthetic microbial mats. Using...

One of the aims of the project was to collect bacterial and archaeal community data and correlate these with environmental conditions in coastal marine sediment, including...

The prime objective of this approach is to study the impacts of genetically modified crops in the rhizosphere environment, to explore uncultured bacteria. A bacterium is most...

The purpose of this study was to determine the culture-independent bacterial community associated with different species of gorgonian octocorals (Eunicea fusca, Eunicea sp., and...

Sequences represent cDNA reverse transcribed from 16S rRNA gene transcripts of the V1-V3 region. Total RNA was extracted from marine sediments collected from the Nankai Trough...