RNA-seq data of A. clarkii, A. percula and C. viridis

This project contains RNA-seq data from two species of the clownfish genus (Amphiprion) - A. clarkii and A. percula - as well as from one species of the sister taxon - Chromis Viridis. This data was used to create a transcriptome assembly for each species using FRAMA (Bens et al. 2016, doi: 10.1186/s12864-015-2349-8). These assemblies as well as public data from other clownfishes (A. ocellaris, A. bicinctus, A. sebae) and further outgroup species were used to search for positively selected genes on the last common ancestor of the clownfishes using PosiGene (Sahm et al. 2017, doi: 10.1093/nar/gkx179).

Identifier
Source https://data.blue-cloud.org/search-details?step=~012169B68C1F9C6BD596BFA065E6537E28FC970ECED
Metadata Access https://data.blue-cloud.org/api/collections/169B68C1F9C6BD596BFA065E6537E28FC970ECED
Provenance
Instrument Illumina HiSeq 2500; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Point 2018-07-17T00:00:00Z