Proteorhodopsin-containing prokaryotes in Marine Environments

Proteorhodopsin containing prokaryotes are a class of photoherotrophic microorganisms that use a relatively simple system to harvest energy from light. This system is composed of a trans-membrane protein called proteorhodopsin (PR) and to the cofactor retinal. When exposed to light, PR changes its conformation and moves a proton from the cytoplasm side to the region between the cellular membrane and the cell wall then changes back to its original conformation. The overall goal of the project is to gain significant insights into the role of marine proteorhodopsin containing prokaryotes in the ocean by identification of PR lineages over one year.

Identifier
Source https://data.blue-cloud.org/search-details?step=~012FFDDF3C9FC08166E32C301E4149EF51C6161807D
Metadata Access https://data.blue-cloud.org/api/collections/FFDDF3C9FC08166E32C301E4149EF51C6161807D
Provenance
Instrument Illumina MiSeq; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (3.543W, 42.453S, 3.543E, 42.453N)
Temporal Coverage Begin 2008-01-29T00:00:00Z
Temporal Coverage End 2009-11-16T00:00:00Z