Monodon monoceros isolate:NGI Genome sequencing and assembly

The evolutionary history of the narwhal, Monodon monoceros, is not well characterized. Investigative informatic groups will study three areas of interest to better understand its extraordinary tusk and unique expression, the evolution of this Arctic restrictive species, and its population over time, and the narwhal’s ability to adapt to a changing Arctic. First, will be an examination of phylogenetics to better understand how exactly this whale evolved. Genomic studies will reveal information to help construct the history over time for this species and its adaptation to past glaciation and fluctuations in temperature and sea levels. Second, will be an analysis of the narwhal’s extraordinary tusk, and how it evolved with such a unique and counterintuitive expression. Comparative genomics using odontocetes, and other tusked animals will be examined as well as comparative studies of mobile elements. Third, will be a study of narwhal health through the use of proteomics to help identify candidate diagnostic and prognostic protein markers of disease and or stress. These molecular signatures will generate hypotheses for future studies as well as improve our fundamental understanding of how human interactions are affecting narwhal health. PSMC analysis, and SNP arrays and polymorphism detection will provide additional information about genetic modifications related to health and adaptation.

Identifier
Source https://data.blue-cloud.org/search-details?step=~01224EA9DA641DD990E710400C49A443F52175372BF
Metadata Access https://data.blue-cloud.org/api/collections/24EA9DA641DD990E710400C49A443F52175372BF
Provenance
Instrument HiSeq X Five; Illumina MiSeq; Illumina HiSeq 4000; Illumina NovaSeq 6000; HiSeq X Ten; Sequel; ILLUMINA; PACBIO_SMRT
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (-84.838W, 65.952S, -80.531E, 72.379N)
Temporal Coverage Begin 2013-08-08T00:00:00Z
Temporal Coverage End 2022-11-03T00:00:00Z