Macrocystis pyrifera genome and annotation

DOI

The dataset contains two files, the Macrocystis pyrifera genome and its annotation. The initial genome version was published by Lipinska et al., 2019. The version published here was modified on several SDR related contigs. Assembly stats: # number of contigs: 160,010 # total contigs length: 581,699,080 # mean contig size: 3,635.39 # contig size first quartile: 518 # median contig size: 911 # contig size third quartile: 2,588 # longest contig: 2,427,982 # shortest contig: 125 # contigs > 500 nt: 123,054 (76.90 %) # contigs > 1K nt: 75,166 (46.98 %) # contigs > 10K nt: 14,565 (9.10 %) # contigs > 100K nt: 68 (0.04 %) # contigs > 1M nt: 2 (0.00 %) # N50 14,255 # L50 9,866 # N80 3,114 # L80 35,566

Identifier
DOI https://doi.org/10.17617/3.G6SL3X
Metadata Access https://edmond.mpg.de/api/datasets/export?exporter=dataverse_json&persistentId=doi:10.17617/3.G6SL3X
Provenance
Creator Haas, Fabian Benjamin
Publisher Edmond
Publication Year 2024
OpenAccess true
Contact FABIAN.HAAS(at)TUEBINGEN.MPG.DE
Representation
Language English
Resource Type Dataset
Version 1
Discipline Other