Genetic variation in OXPHOS and associated H2S detoxification enzymes in sulfide-adapted fish

We quantify genetic variation in components of OXPHOS and associated H2S detoxification enzymes in natural populations of Poecilia mexicana from sulfidic and non-sulfidic habitats. Our targets include approximately mitochondrial and nuclear genes, including all subunits of OXPHOS components, ATP synthase, and enzymes associated with the SQR pathway, as well as relevant assembly factors. Genetic variation at these loci was assayed in N=30 individuals per population (for a total of N=200) through targeted capture sequencing. For comparisons, we will also sequenced genes that are nuclear-encoded, mitochondrial proteins (matched for length and identity), but do not play a role in the targeted pathways.

Identifier
Source https://data.blue-cloud.org/search-details?step=~0123C02EE353B5F0393B2B20F321CC32236C60845D2
Metadata Access https://data.blue-cloud.org/api/collections/3C02EE353B5F0393B2B20F321CC32236C60845D2
Provenance
Instrument Illumina HiSeq 2500; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (-93.104W, 17.427S, -92.752E, 17.556N)
Temporal Point 2013-01-01T00:00:00Z