Whole Genome Shotgun Sequencing Project of Vibrio coralliilyticus strain SWA07

This study describes the whole genome of Vibrio coralliilyticus strain SWA07, isolated from seawater in 2007, at Sesoko beach, Okinawa. This bacterium is known to be pathogenic to corals and hence we used it to isolate specific phages from seawater. Novel phages were isolated from using this bacteria (Ramphul et al. 2017), especially the phage RYC. From the results, we wanted to know if there is any kind of proteins which have been transferred from the host bacteria to the phage RYC through several mechanisms. Consequently, this new study is under designed to explore those mechanisms by first comparing the genomes of phage RYC to Vibrio coralliilyticus strain SWA07 and second by identifying similar codons that are being shared or transferred from bacteria to phages though tRNAs. This study will help to understand how the novel phage RYC functions and to add more knowledge on the phage RYC.

Identifier
Source https://data.blue-cloud.org/search-details?step=~012E598F718FEE614D029DF6807701481A59A6D1AF3
Metadata Access https://data.blue-cloud.org/api/collections/E598F718FEE614D029DF6807701481A59A6D1AF3
Provenance
Instrument Illumina MiSeq; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (127.520W, 26.420S, 127.520E, 26.420N)
Temporal Point 2007-01-01T00:00:00Z