An improved reference of the PN40024 grapevine genome assembly (PN40024.v4) and annotations

DOI

Here, we provide an improved version of the PN40024 genome assembly, called PN40024.v4, which combines the top-quality Sanger contigs from the 12X version with Pacific Biosciences long reads (Sequel SMRT). Along with this new assembly, we also provide a new version of the gene annotation, called PN40024.v4.1 based on a newly developed annotation workflow, RNA-Seq datasets and manual curation of a set of genes of functional interest to the community.

Identifier
DOI https://doi.org/10.57745/F9N2FZ
Metadata Access https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.57745/F9N2FZ
Provenance
Creator VELT, Amandine (ORCID: 0000-0003-2368-839X)
Publisher Recherche Data Gouv
Contributor VELT, Amandine; RUSTENHOLZ, Camille; Entrepôt-Catalogue Recherche Data Gouv
Publication Year 2022
Rights etalab 2.0; info:eu-repo/semantics/openAccess; https://spdx.org/licenses/etalab-2.0.html
OpenAccess true
Contact VELT, Amandine (INRAE); RUSTENHOLZ, Camille (INRAE)
Representation
Resource Type Dataset
Format text/plain; application/octet-stream; application/pdf; text/tab-separated-values
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Version 1.0
Discipline Agriculture, Forestry, Horticulture; Life Sciences; Agricultural Sciences; Agriculture, Forestry, Horticulture, Aquaculture; Agriculture, Forestry, Horticulture, Aquaculture and Veterinary Medicine; Medicine