RNA-seq of RTS11 Macrophage-like cell line treated with Beta-glucans against untreated controls

This experiment focused on the transcriptomic responses of the rainbow trout spleen macrophage-like cell line (RTS11) in response to ß-glucans (M-glucans, Biotec). RTS11 was cultured at the Scottish Fish Immunology Research Centre, University of Aberdeen. M-glucans was provided by Skretting AI. Samples were treated for 4hrs with either M-glucans or left untreated as controls (n=4). To establish responses to ß-glucans, total RNA was extracted for RNA-seq examination. Library preparation and sequencing was carried out by Novogene Ltd, with downstream analysis being carried out at the SFIRC. As a result, a total of 8 samples were used to identify responses to M-glucans, 4 control and 4 stimulated samples were used for the analysis.

Identifier
Source https://data.blue-cloud.org/search-details?step=~0124BFF2A0196ACD95FF213410116D504427D65C722
Metadata Access https://data.blue-cloud.org/api/collections/4BFF2A0196ACD95FF213410116D504427D65C722
Provenance
Instrument Illumina NovaSeq 6000; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Contributor European Bioinformatics Institute;Scottish Fish Immunology Research Centre;University of Aberdeen
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Point 2023-03-07T00:00:00Z