-
Horse nemabiome benchmark
This repository contains codes and input data used to benchmark the metabarcoding of cyathostomin (horse parasites) using the internal transcribed spacer 2 region, and to test... -
Sea lamprey (Petromyzon marinus L.) nests do not affect stream functionality ...
The sea lamprey (Petromyzon marinus L.) can be considered an engineer species, as it can substantially modify the river beds where it spawns. Sea lampreys dig nests by removing... -
Transposable element annotation of Septoria linicola SE15195 and SE14017
Transposable elements (TEs) were annotated on genome assemblies of Septoria linicola SE15195 (accession numbers CP099418 to CP099434) and SE14017 (accession number... -
Four HMM models for basidiomycete sesquiterpene cyclases
Sesquiterpene cyclases (STC) catalyze the removal of inorganic diphosphate (PPi) from farnesyl diphosphate, and the cyclization of the resulting carbocation. In fungi, STC that... -
Données de réplication pour : Analyse de tendances climatiques localisées sur...
R codes for localized analysis of past and future climate trends in the Lozère department, the result of a project by AgroParisTech engineers in the 3A GEAC 2022-2023 class.... -
Minimal dataset for SQuIRE usage on Prunus Marouch
This dataset is composed of 3 files: (1) the sequence genome of Marouch (.fasta) (2) the annotation of Marouch genome (.gff3) (3) the rmsk informations from RepeatMasker... -
Projet BoscEnFlux - Cartographie ~1850 de l'occupation des sols basée sur une...
💡 Le projet | BoscEnFlux, programme de recherche soutenu par la région Nouvelle Aquitaine, propose de relire les trajectoires des espaces forestiers néo-aquitains par une... -
Dataset for "High-throughput phenotyping to characterise range use behaviour ...
A key characteristic of free-range chicken farming is to enable chickens to spend time outdoors. However, each chicken may use the available areas for roaming in variable ways.... -
Energetically accurate lipid-protein association for incorporation into membr...
This dataset contains the input, configuration and output files described in Lanrezac & Baaden 2023. It also contains binaries or UnityMol, MDDriver and BioSpring, which are... -
Données de réplication pour : Trait-independent habitat associations explain ...
On oceanic islands, ecosystem processes hold on a limited number of species. However, their patterns of coexistence and the resulting variations of assemblage composition along... -
Questionnaire pour mener un retour d'expérience sur les impacts d'une inondat...
Ce questionnaire a été élaboré par l'équipe de l'observatoire so-ii suite à l'inondation du 19 septembre 2020 sur le territoire d'étude de so-ii (bassin versant du Lez et Bassin... -
Characterization of biodegradable core–clad borosilicate glass fibers with ro...
Data set from Characterization of biodegradable core–clad borosilicate glass fibers with round and rectangular cross-section. - Publication : Hongisto M., Ghanavati S.,... -
Xenorhabdus kozodoii FR48 epigenetic data
DNA methylation was determined using the ds_modification_motif_analysis protocol within SMRT Link 5.1.0 which uses an in silico kinetic reference and a Welch’s t-test based... -
Lidar data acquired by drone in the Louchats forest, Gironde, France
Acquisition date : 2022/07/06 Sensor :Yellowscan, Surveyor - GNSS-inertial station: Applanix APX-15 UAV - Lidar: Velodyne VLP16 (Puck) : Wavelength: 905 nm / 300,000 pulses per... -
Quantifying anthropogenic effect on S. cerevisiae vineyard metapopulation div...
This dataset contains all genotypes files used in the manuscript for various genetic analyses. -
Ice texture data from ice core, NEEM, Greenland, 2007-2012
NEEM (North Greenland Eemian Ice Drilling) was an international ice core research project in Greenland. As other projects like GRIP and NGRIP, this ice core had the goal to... -
Transposable element annotation of Botrytis cinerea Sl3 and Vvl3
Transposable elements (TEs) were annotated on genome assemblies of Botrytis cinerea Sl3 (accession numbers CP080979-CP080996) and Vv3 (accession numbers CP080961-CP080978),... -
Interest of phenomic prediction as an alternative to genomic prediction in gr...
Data and script analysis for phenomic and genomic predictions in grapevine. -
Data, R scripts and ASReml scripts
########################################################################################## OBJECTIVE: Procedure to perform the data handling and the analyses + details about the... -
Adaptation of S. cerevisiae to fermented food environments reveals remarkable...
Different Variant data set combining genotypic data data from the newly sequenced strains and data from available genomes sequences obtained at SGD. Data at vcf format or at...