Supplement for: Adaptive cell wall thickening in Enterococcus faecalis is associated with decreased vancomycin susceptibility

DOI

Supplement for  «Adaptive cell wall thickening in Enterococcus faecalis is associated with decreased vancomycin susceptibility»   Table1: Supplementary_table1_Snpdist.csv SNP distance of isolates as calculated using Snippy with E03812 as reference. Columns and rows are strains as indicated.   Table2: Supplementary_table2_Snpcomparison_psortb.csv SNP annotation using SnpEff and subcellular localization of their corresponding proteins was predicted using PsortB. Columns indicate REF=SNP in the reference, ALT= SNP in the sample isolate, VARIANT=type of variant (SnpEff), psortb_localisation=subcellular localization predicted by psortB, psortb_score= score from psortB, product= gene annotation. Subsequent columns indicate presence/absence of a SNP within each strain.

Identifier
DOI https://doi.org/10.18710/5QMKDN
Related Identifier IsCitedBy https://doi.org/10.1016/j.cmi.2023.12.002
Metadata Access https://dataverse.no/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.18710/5QMKDN
Provenance
Creator Wagner, Theresa Maria ORCID logo; Pöntinen, Anna ORCID logo; Rubaye, Mushtaq AL (ORCID: 0000-0003-0395-120X); Sundsfjord, Arnfinn ORCID logo; Hegstad, Kristin ORCID logo
Publisher DataverseNO
Contributor Wagner, Theresa; UiT The Arctic University of Norway
Publication Year 2023
Funding Reference Northern Norway Regional Health Authority Medical Research Programme HNF1474-19 ; Northern Norway Regional Health Authority Medical Research Programme HNF1362-17
Rights CC0 1.0; info:eu-repo/semantics/openAccess; http://creativecommons.org/publicdomain/zero/1.0
OpenAccess true
Contact Wagner, Theresa (UiT The Arctic University of Norway, PO Box 6050 Langnes, N-9037 Tromsø)
Representation
Resource Type experimental data; Dataset
Format text/plain; text/comma-separated-values
Size 6980; 15260; 6512
Version 2.1
Discipline Life Sciences; Medicine