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Supplement for: Adaptive cell wall thickening in Enterococcus faecalis is ass...
Supplement for «Adaptive cell wall thickening in Enterococcus faecalis is associated with decreased vancomycin susceptibility» Table1: Supplementary_table1_Snpdist.csv SNP... -
Parentage assignment in ducks using a 96 SNP panel.
Jeu de données contenant le génotype de 3 lots de canards de pedigree inconnu et de leurs parents potentiels pour 96 SNP. En utilisant un package adéquat, le script fourni... -
High quality G-to-A SNPs from the genomes of 96 wild caught three-spine stick...
To improve the methylation estimates in our study, we corrected for SNPs, which could have led to a wrong methylation call. The excluded positions were derived with custom... -
High quality C-to-T SNPs from the genomes of 96 wild caught three-spine stick...
To improve the methylation estimates in our study, we corrected for SNPs, which could have led to a wrong methylation call. The excluded positions were derived with custom... -
GoNL SNPs and Indels release 5
Summary counts of SNV and small indels <20bp from only the parents (498 individuals) from the Genome of the Netherlands (GoNL) project. -
Plasmopara halstedii, SNP matrix of 17 french pathotypes
Matrice SNP pour 17 génotypes de Plasmopara halstedii produite a partir d'un reséquençage NGS et utilisant comme référence le génome de Plasmopara halstedii 710. bwa,... -
Genotypic data and genetic map for Syrah x Grenache bi-parental grapevine pop...
This dataset, intended for QTL detection and genomic prediction, includes : 1) the SNP genotyping data, in vcf format, obtained by GBS in a grapevine bi-parental population, and... -
TREEPEACE: Development of target sequence capture and estimation of genomic ...
Le jeu de données est constitué de 191,281 SNPs identifiés dans 297 arbres (mélange de Q. robur et Q. petraea) situés dans la forêt de La Petite Charnie. Ces SNPs ont été... -
High density genotyping dataset associated to the paper entitled « The geneti...
This dataset consists of genotypes of 528 animals belonging to 13 cattle populations for 680338 variants (SNPs) in plink format. The compressed archive contains two files: (i) a... -
A dataset of 9.896 single nuclear polymorphisms for 112 wild grapes, obtained...
The dataset, comprising 9.896 SNPs for 112 wild grapes (Vitis vinifera subsp. sylvestris), is made available here in support of the paper : Ramos-Madrigal J, Wiborg Runge AK,... -
Updated results to publication “Estimation of Recombination Rate and Maternal...
In Hampel et al. (2018, Fron Genet), we proposed an advanced method for the estimation of paternal recombination rate and maternal linkage disequilibrium between pairs of SNPs... -
Supplementary data to publication “An approximate Bayesian significance test ...
A simulation study has been conducted to analyse the association between genetic and phenotypic variation in livestock. Following the density and distribution of single... -
SNPs for thornback ray Raja clavata, validated from genotyped individuals
We developed a panel of single nucleotide polymorphism (SNP) markers for thornback ray Raja clavata using a RADSeq protocole. Demultiplexed sequences were aligned to the genome... -
SNP discovery and validation for parentage assignment in hatchery progeny of ...
Selective breeding strategies require pedigree information over generations, but many species produced in aquaculture are too small to be physically tagged at early stages....
